Research output per year
Research output per year
Infrastructure Details
Acronym
CTG
Name of national/international infrastructure this infrastructure belongs to
CTG forms together with CMD (Center for Molecular Diagnostics) Clinical Genomics Lund facility, one of four facilities in the Diagnostic Development platform within the infrastructure of Science for Life Laboratory (SciLifeLab).
Description
The Center for Translational Genomics (CTG) offers expertise and service in genomic technologies to promote translational research projects or projects aiming at clinical implementation of new diagnostic assays in healthcare.
Equipment and resources
Illumina NovaseqX Plus
Illumina NextSeq2000
10X Genomics Chromium X
10X Genomics Visium CytAssist
Scienion CellenOne
Agilent TapeStation 4200
Thermo Fisher QubitFlex
Thermo Scientific Fluoroscan
Myra Liquid Handler
Beckman Biomek i7 Liquid Handler
Thermo Fisher Absolute Q Digital PCR
Thermo Fisher QuantStudio 5 qPCR
Illumina NextSeq2000
10X Genomics Chromium X
10X Genomics Visium CytAssist
Scienion CellenOne
Agilent TapeStation 4200
Thermo Fisher QubitFlex
Thermo Scientific Fluoroscan
Myra Liquid Handler
Beckman Biomek i7 Liquid Handler
Thermo Fisher Absolute Q Digital PCR
Thermo Fisher QuantStudio 5 qPCR
Services provided
Project consultations
Sample Quality Control (QC)
DNA and RNA Library Preparation and Sequencing
Single Cell Omics Library Preparation and Sequencing
Spatial Transcriptomics Profiling
Sequencing of user-provided libraries
Sample Quality Control (QC)
DNA and RNA Library Preparation and Sequencing
Single Cell Omics Library Preparation and Sequencing
Spatial Transcriptomics Profiling
Sequencing of user-provided libraries
Subject classification (UKÄ)
- Medical and Health Sciences
Infrastructure category
- Faculty Core Facility
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Single-cell genomics details the maturation block in BCP-ALL and identifies therapeutic vulnerabilities in DUX4-r cases
Thorsson, H., Henningsson, R., Puente-Moncada, N., Peña-Martínez, P., Sjöström, L., Ågerstam, H., Sandén, C., Rissler, M., Castor, A., Marquart, H., Modvig, S., Paulsson, K., Pronk, C. J., Schmiegelow, K., Hyrenius-Wittsten, A., Orsmark-Pietras, C., Lilljebjörn, H. & Fioretos, T., 2024 Sept 26, In: Blood. 144, 13, p. 1399-1411Research output: Contribution to journal › Article › peer-review
Open Access -
In vivo dendritic cell reprogramming for cancer immunotherapy
Ascic, E., Åkerström, F., Sreekumar Nair, M., Rosa, A., Kurochkin, I., Zimmermannova, O., Catena, X., Rotankova, N., Veser, C., Rudnik, M., Ballocci, T., Schärer, T., Huang, X., de Rosa Torres, M., Renaud, E., Velasco Santiago, M., Met, Ö., Askmyr, D., Lindstedt, M. & Greiff, L. & 6 others, , 2024, In: Science (New York, N.Y.). 386, 6719Research output: Contribution to journal › Article › peer-review
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Orchestrating an immune response to cancer with cellular reprogramming
Zimmermannova, O., Ferreira, A. G. & Pereira, C. F., 2024, In: Genes and Immunity. 25, 1, p. 95–97 3 p.Research output: Contribution to journal › Letter › peer-review
Open Access -
In vivo gene expression profile of Haemophilus influenzae during human pneumonia.
Polland, L., Rydén, H., Su, Y. & Paulsson, M., 2023, In: Microbiology spectrum. 11, 5, e0163923.Research output: Contribution to journal › Article › peer-review
Open Access -
UROSCAN and UROSCANSEQ: a large-scale multicenter effort towards translation of molecular bladder cancer subtypes into clinical practice–from biobank to RNA-sequencing in real time
Liedberg, F., Abrahamsson, J., Bernardo, C., Bläckberg, M., Edsjö, A., Heidenblad, M., Larsson, C., Sjödahl, G. & Eriksson, P., 2023, In: Scandinavian Journal of Urology. 57, 1-6, p. 2-9Research output: Contribution to journal › Article › peer-review
Open Access -
Single-cell transcriptional profiling informs efficient reprogramming of human somatic cells to cross-presenting dendritic cells
Rosa, F. F., Pires, C. F., Kurochkin, I., Halitzki, E., Zahan, T., Arh, N., Zimmermannová, O., Ferreira, A. G., Li, H., Karlsson, S., Scheding, S. & Pereira, C.-F., 2022, In: Science Immunology. 7, 69, p. 1-18 eabg5539.Research output: Contribution to journal › Article › peer-review
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A urinary extracellular vesicle microRNA biomarker discovery pipeline; from automated extracellular vesicle enrichment by acoustic trapping to microRNA sequencing
Ku, A., Ravi, N., Yang, M., Evander, M., Laurell, T., Lilja, H. & Ceder, Y., 2019, In: PLoS ONE. 14, 5, e0217507.Research output: Contribution to journal › Article › peer-review
Open Access