Center for Translational Genomics (CTG)

Research output

Research output per year 2021 2021 2022 2022

• 4 Article
• 1 Letter
• 1 Review article

Research output per year

Research output per year

Search results

• 2022

  A cis-acting structural variation at the ZNF558 locus controls a gene regulatory network in human brain development

  Johansson, P. A., Brattås, P. L., Douse, C. H., Hsieh, P., Adami, A., Pontis, J., Grassi, D., Garza, R., Sozzi, E., Cataldo, R., Jönsson, M. E., Atacho, D. A. M., Pircs, K., Eren, F., Sharma, Y., Johansson, J., Fiorenzano, A., Parmar, M., Fex, M., Trono, D., & 2 othersEichler, E. E. & Jakobsson, J., 2022, In: Cell Stem Cell. 29, 1, p. 52-69.e8

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Internal-External Control 100%
  • Gene Regulatory Networks 90%
  • Human Development 89%
  • Pan troglodytes 61%
  • Brain 40%

• Implementing precision medicine in a regionally organized healthcare system in Sweden

  Fioretos, T., Wirta, V., Cavelier, L., Berglund, E., Friedman, M., Akhras, M., Botling, J., Ehrencrona, H., Engstrand, L., Helenius, G., Fagerqvist, T., Gisselsson, D., Gruvberger-Saal, S., Gyllensten, U., Heidenblad, M., Höglund, K., Jacobsson, B., Johansson, M., Johansson, Å., Soller, M. J., & 23 othersLandström, M., Larsson, P., Levin, L-Å., Lindstrand, A., Lovmar, L., Lyander, A., Melin, M., Nordgren, A., Nordmark, G., Mölling, P., Palmqvist, L., Palmqvist, R., Repsilber, D., Sikora, P., Stenmark, B., Söderkvist, P., Stranneheim, H., Strid, T., Wheelock, C. E., Wadelius, M., Wedell, A., Edsjö, A. & Rosenquist, R., 2022 Oct, In: Nature Medicine. 28, 10, p. 1980-1982

  Research output: Contribution to journal › Letter › peer-review

• Transcriptomics paving the way for improved diagnostics and precision medicine of acute leukemia

  Lilljebjörn, H., Orsmark-Pietras, C., Mitelman, F., Hagström-Andersson, A. & Fioretos, T., 2022, In: Seminars in Cancer Biology. 84, p. 40-49

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • RNA Sequence Analysis 100%
  • Precision Medicine 96%
  • Leukemia 72%
  • Precursor Cell Lymphoblastic Leukemia-Lymphoma 58%
  • Acute Myeloid Leukemia 56%

• UROSCAN and UROSCANSEQ: a large-scale multicenter effort towards translation of molecular bladder cancer subtypes into clinical practice–from biobank to RNA-sequencing in real time

  Liedberg, F., Abrahamsson, J., Bernardo, C., Bläckberg, M., Edsjö, A., Heidenblad, M., Larsson, C., Sjödahl, G. & Eriksson, P., 2022, (Accepted/In press) In: Scandinavian Journal of Urology.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • RNA Sequence Analysis 100%
  • Urinary Bladder Neoplasms 85%
  • Neoplasms 24%
  • Population 9%
  • RNA 8%
• 2021

  Pan-cancer application of a lung-adenocarcinoma-derived gene-expression-based prognostic predictor

  Nacer, D. F., Liljedahl, H., Karlsson, A. F., Lindgren, D. & Staaf, J., 2021, In: Briefings in Bioinformatics. 22, 6, bbab154.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Gene expression 100%
  • Adenocarcinoma of Lung 97%
  • Classifiers 64%
  • Tumors 56%
  • Gene Expression 54%

• Single-cell sequencing in translational cancer research and challenges to meet clinical diagnostic needs

  Pfisterer, U., Bräunig, J., Brattås, P., Heidenblad, M., Karlsson, G. & Fioretos, T., 2021 Jul 1, In: Genes, Chromosomes and Cancer. 60, 7, p. 504-524 21 p.

  Research output: Contribution to journal › Review article › peer-review

  Open Access

  • Translational Medical Research 100%
  • Single-Cell Analysis 59%
  • Neoplasms 28%
  • High-Throughput Nucleotide Sequencing 21%
  • Transcriptome 20%