Research output per year
Research output per year
Personal profile
Research
I am a senior bioinformatician at the National Bioinformatics Infrastructure Sweden (NBIS) which is the SciLifeLab Bioinformatics Platform. I work in the team for bioinformatics long-term support. My position is within the local node at the Department of Biology, Lund University. The main objectives of our team are to
- Provide advanced bioinformatics support to nationally prioritized projects
- Provide teaching at national and regional courses and workshops
- Promote national and regional bioinformatics networking and knowledge transfer
- Take part in the continuous development and improvement of the bioinformatics support at a national level
Supported scientific areas include medical, evolutionary, ecological and environmental genomics.
UKÄ subject classification
- Bioinformatics and Systems Biology
- Cell and Molecular Biology
- Cancer and Oncology
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PARKIN is not required to sustain OXPHOS function in adult mammalian tissues
Filograna, R., Gerlach, J., Choi, H-N., Rigoni, G., Barbaro, M., Oscarson, M., Lee, S., Tiklova, K., Ringnér, M., Koolmeister, C., Wibom, R., Riggare, S., Nennesmo, I., Perlmann, T., Wredenberg, A., Wedell, A., Motori, E., Svenningsson, P. & Larsson, N-G., 2024 Apr 29, In: npj Parkinson's Disease. 10, 93.Research output: Contribution to journal › Article › peer-review
Open Access -
PRC2-mediated repression is essential to maintain identity and function of differentiated dopaminergic and serotonergic neurons
Toskas, K., Yaghmaeian-Salmani, B., Skiteva, O., Paslawski, W., Gillberg, L., Skara, V., Antoniou, I., Södersten, E., Svenningsson, P., Chergui, K., Ringnér, M., Perlmann, T. & Holmberg, J., 2022 Aug 26, In: Science Advances. 8, 34, 20 p., eabo1543.Research output: Contribution to journal › Article › peer-review
Open Access -
Environmentally induced DNA methylation is inherited across generations in an aquatic keystone species
Feiner, N., Radersma, R., Vasquez, L., Ringnér, M., Nystedt, B., Raine, A., Tobi, E. W., Heijmans, B. T. & Uller, T., 2022 May 6, In: iScience. 25, 5, 18 p., 104303.Research output: Contribution to journal › Article › peer-review
Open Access -
Mitochondrial dysfunction in adult midbrain dopamine neurons triggers an early immune response
Filograna, R., Lee, S., Tiklova, K., Mennuni, M., Jonsson, V., Ringnér, M., Gillberg, L., Sopova, E., Shupliakov, O., Koolmeister, C., Olson, L., Perlmann, T. & Larsson, N-G., 2021 Oct 7, In: PLoS Genetics. 17, 9, p. e1009822 19 p.Research output: Contribution to journal › Article › peer-review
Open Access -
Mutational patterns and clonal evolution from diagnosis to relapse in pediatric acute lymphoblastic leukemia
Sayyab, S., Lundmark, A., Larsson, M., Ringnér, M., Nystedt, S., Marincevic-Zuniga, Y., Tamm, K. P., Abrahamsson, J., Fogelstrand, L., Heyman, M., Norén-Nyström, U., Lönnerholm, G., Harila-Saari, A., Berglund, E. C., Nordlund, J. & Syvänen, A-C., 2021 Aug 6, In: Scientific Reports. 11, 15988.Research output: Contribution to journal › Article › peer-review
Open Access
Projects
- 2 Finished
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Bioinformatics - ASG, Pufendorf IAS
Vihinen, M., Mulder, H., Höglund, M., Medstrand, P., Franks, P., Ringnér, M., Renström, F., Ling, C., Mcguigan, F., Ahlqvist, E., von Wachenfeldt, C., Ahrén, D., Fontes, M. & Johansson, J.
2013/08/12 → 2014/08/12
Project: Network
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Epigenetics - Theme, Pufendorf IAS
Forsén, S., Castor, A., Bengtsson, T., Brosberg, K., Hedlund, M., Höglund, M., Lindvall, M., Ling, C., Minssen, T., Paulsson, K., Psouni, E., Ringnér, M., Bommenel, E. & Lundin, S.
2009/08/09 → 2010/08/10
Project: Network
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Anna Karlsson
Markus Ringnér (Second supervisor)
2018 Oct 19Activity: Examination and supervision › Supervision of PhD students
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Mattias Aine
Markus Ringnér (Second supervisor)
2015 Dec 10Activity: Examination and supervision › Supervision of PhD students
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Christofer Bäcklin
Markus Ringnér (Examiner)
2015 Mar 13Activity: Examination and supervision › External Reviewer of PhD thesis/Opponent
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Gottfrid Sjödahl
Markus Ringnér (Second supervisor)
2013 Dec 12Activity: Examination and supervision › Supervision of PhD students
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Ida Johansson
Markus Ringnér (Second supervisor)
2013 Dec 6Activity: Examination and supervision › Supervision of PhD students
Infrastructure
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National Bioinformatics Infrastructure Sweden
Dag Ahrén (Manager), Markus Ringnér (Manager), Fredrik Levander (Manager), Lokeshwaran Manoharan (Manager), Nikolay Oskolkov (Manager), Louella Judy Antonio Vasquez (Manager), Paul Theodor Pyl (Manager), Prasoon Agarwal (Manager), Yuan Li (Manager), Massimiliano Volpe (Manager) & Katja Kozjek (Manager)
Department of BiologyInfrastructure