Personal profile
Research
I am interested in how protein dynamics contribute to biological function. In my research group we primarily use nuclear magnetic resonance (NMR) spectroscopy to study protein dynamics over a wide range of time scales, from picoseconds to seconds. We address specific questions regarding the role of protein dynamics in various types of function and dysfunction, for example: ligand binding and allostery, enzyme catalysis, and protein misfolding and aggregation. To achieve this, we develop new NMR methods and often interpret the results in combination with molecular dynamics simulations.
Our research has resulted in unique insights showing how conformational entropy can contribute significantly to ligand binding and allostery, which has future applications in the field of drug design. Another key result is the critical role of rare, transient, high-energy conformations in biological function: proteins spontaneously undergo transitions between multiple structural states that are either active or inactive. These types of transitions can mediate allosteric signaling within proteins via distinct pathways that we have detected using NMR spectroscopy.
Subject classification (UKÄ)
- Physical Chemistry (including Surface- and Colloid Chemistry)
- Structural Biology
- Biological Sciences
Expertise related to UN Sustainable Development Goals
In 2015, UN member states agreed to 17 global Sustainable Development Goals (SDGs) to end poverty, protect the planet and ensure prosperity for all. This person’s work contributes towards the following SDG(s):
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SDG 3 Good Health and Well-being
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SDG 4 Quality Education
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Collaborations the last five years
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Biocatalytic reductive amination with CRISPR-Cas9 engineered yeast
Hagman, A., Stenström, O., Carlström, G., Akke, M., Grey, C. & Carlquist, M., 2025 Dec, In: Scientific Reports. 15, 14 p., 16972.Research output: Contribution to journal › Article › peer-review
Open Access -
Tipping point in α-synuclein-membrane interactions from stable protein-covered vesicles to amyloid aggregation
Makasewicz, K., Carlström, G., Stenström, O., Bernfur, K., Fridolf, S., Akke, M., Linse, S. & Sparr, E., 2024 Dec, In: Cell Reports Physical Science. 5, 12, 102309.Research output: Contribution to journal › Article › peer-review
Open Access -
19F Fast Magic-Angle Spinning NMR Spectroscopy on Microcrystalline Complexes of Fluorinated Ligands and the Carbohydrate Recognition Domain of Galectin-3
Kalabekova, R., Quinn, C. M., Movellan, K. T., Gronenborn, A. M., Akke, M. & Polenova, T., 2024 Sept 3, In: Biochemistry. 63, 17, p. 2207-2216 10 p.Research output: Contribution to journal › Article › peer-review
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Proton Transfer Kinetics in Histidine Side Chains Determined by pH-Dependent Multi-Nuclear NMR Relaxation
Raum, H. N., Modig, K., Akke, M. & Weininger, U., 2024 Aug, In: Journal of the American Chemical Society. 146, 32, p. 22284-22294 11 p.Research output: Contribution to journal › Article › peer-review
Open Access -
Interplay of halogen bonding and solvation in protein-ligand binding
Verteramo, M. L., Ignjatović, M. M., Kumar, R., Wernersson, S., Ekberg, V., Wallerstein, J., Carlström, G., Chadimová, V., Leffler, H., Zetterberg, F., Logan, D. T., Ryde, U., Akke, M. & Nilsson, U. J., 2024 Apr 19, In: iScience. 27, 4, 109636.Research output: Contribution to journal › Article › peer-review
Open Access
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Decoding Dynamics and Energetics of Allosteric signaling
Akke, M. (Researcher), Snogerup-Linse, S. (CoPI) & Lindahl, E. (CoPI)
Knut and Alice Wallenberg Foundation
2023/07/01 → 2028/06/30
Project: Research
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DynaPLIX: Dynamics of Protein–Ligand Interactions
Akke, M. (Researcher)
European Commission - Horizon Europe
2023/05/01 → 2029/04/30
Project: Research
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Engineering of bacteria and fermentation methods for sustainable large-scale production of alkylamines
Carlquist, M. (PI), Johansson, M. (Research student) & Akke, M. (Researcher)
FORMAS, The Swedish Research Council for Environment, Agricultural Sciences and Spatial Planning
2022/09/01 → 2027/02/28
Project: Dissertation
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Protein dynamics and conformational disorder in molecular recognition and signaling
Akke, M. (PI)
2022/01/01 → 2026/12/31
Project: Research
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MoReLife : Molecular Recognition in Life
Paulsson, K. M. (Project coordinator), Lagerstedt, J. (Project coordinator), Zackrisson, M. (Project coordinator), Akke, M. (CoI), von Wachenfeldt, C. (CoI) & Dicko, C. (Project coordinator)
2010/10/20 → 2019/12/31
Project: Network
Activities
- 1 Media participation
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LUM: Protein researcher receives major grants
Akke, M. (Interviewee) & Sellergren, J. (Lyricist)
2023 Sept 14Activity: Other › Media participation
Prizes and Distinction
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Member of the Royal Swedish Academy of Sciences
Akke, M. (Recipient), 2013
Prize: Election to learned society
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Member of the Royal Physiographic Society in Lund
Akke, M. (Recipient), 2012
Prize: Election to learned society
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The Göran Gustafsson Prize in Chemistry
Akke, M. (Recipient), 2007
Prize: Prize (including medals and awards)
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Professeur Invité, École Normale Supérieur, Paris
Akke, M. (Recipient), 2005
Prize: National/international honour
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