Research output per year
Research output per year
Personal profile
Research
I am a bioinformatician with interests in statistical analysis and machine learning. I did my PhD in theoretical physics in 2007, and switched to Computational Biology and Life Sciences in 2011. My expertise includes genomics, transcriptomics, microbiome analysis, ancient and environmental DNA, single cell and evolutionary biology.
Expertise related to UN Sustainable Development Goals
In 2015, UN member states agreed to 17 global Sustainable Development Goals (SDGs) to end poverty, protect the planet and ensure prosperity for all. This person’s work contributes towards the following SDG(s):
Subject classification (UKÄ)
- Bioinformatics and Computational Biology
- Medical and Health Sciences
Free keywords
- National Bioinformatics Infrastructure Sweden
- NBIS
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Collaborations the last five years
Recent external collaboration on country/territory level. Dive into details by clicking on the dots or
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Predicting type 2 diabetes via machine learning integration of multiple omics from human pancreatic islets
Rönn, T., Perfilyev, A., Oskolkov, N. & Ling, C., 2024 Dec, In: Scientific Reports. 14, 1, 14637.Research output: Contribution to journal › Article › peer-review
Open Access -
Unraveling the ancient fungal DNA from the Iceman gut
Oskolkov, N., Sandionigi, A., Götherström, A., Canini, F., Turchetti, B., Zucconi, L., Mimmo, T., Buzzini, P. & Borruso, L., 2024 Dec, In: BMC Genomics. 25, 1225.Research output: Contribution to journal › Article › peer-review
Open Access -
Temporal dynamics of woolly mammoth genome erosion prior to extinction
Dehasque, M., Morales, H. E., Díez-Del-Molino, D., Pečnerová, P., Chacón-Duque, J. C., Kanellidou, F., Muller, H., Plotnikov, V., Protopopov, A., Tikhonov, A., Nikolskiy, P., Danilov, G. K., Giannì, M., van der Sluis, L., Higham, T., Heintzman, P. D., Oskolkov, N., Gilbert, M. T. P., Götherström, A. & van der Valk, T. & 2 others, , 2024 Jul, In: Cell. 187, 14, p. 3531-3540.e13Research output: Contribution to journal › Article › peer-review
Open Access -
Epigenetic modulators link mitochondrial redox homeostasis to cardiac function in a sex-dependent manner
ElBeck, Z., Hossain, M. B., Siga, H., Oskolkov, N., Karlsson, F., Lindgren, J., Walentinsson, A., Koppenhöfer, D., Jarvis, R., Bürli, R., Jamier, T., Franssen, E., Firth, M., Degasperi, A., Bendtsen, C., Menzies, R. I., Streckfuss-Bömeke, K., Kohlhaas, M., Nickel, A. G. & Lund, L. H. & 3 others, , 2024 Mar 20, In: Nature Communications. 15, 2358.Research output: Contribution to journal › Article › peer-review
Open Access -
Identification of microbial pathogens in Neolithic Scandinavian humans
Bergfeldt, N., Kırdök, E., Oskolkov, N., Mirabello, C., Unneberg, P., Malmström, H., Fraser, M., Sanchez-Quinto, F., Jorgensen, R., Skar, B., Lidén, K., Jakobsson, M., Storå, J. & Götherström, A., 2024 Mar 7, In: Scientific Reports. 14, 5630.Research output: Contribution to journal › Article › peer-review
Open Access
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COMPUTE research school (continuation)
Aits, S. (Project coordinator), Hein, J. (Project coordinator), Davies, M. B. (Project coordinator), Birken, P. (Project coordinator), Oskolkov, N. (Researcher), Ullner, M. (Researcher), Smirnova, O. (Researcher), Doglioni, C. (Researcher), Topp, E. A. (Researcher), Andersson, E. (Research student) & Lindh, L. (Researcher)
2021/01/01 → …
Project: Other
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Lysosomes in cell death - from molecular mechanisms to new treatment strategies
Aits, S. (PI), Ahmed, R. (Research student), Kazemi Rashed, S. (Research student) & Oskolkov, N. (Researcher)
Fabrikant Einar Willumsens Mindelegat, Stiftelsen Sigurd och Elsa Goljes Minne, The Royal Physiographic Society in Lund, Swedish Research Council, Crafoord Foundation, Hjärnfonden, Stiftelsen Längmanska kulturfonden, Thorsten och Elsa Segerfalks Stiftelse för främjande av medicinsk vetenskaplig forskning och utbildning
2017/01/01 → 2023/12/31
Project: Research
Activities
- 1 Organisation of public lecture/debate/seminar
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Fika-to-Fika Workshop: Language Technology in Medicine and Life Sciences
Wisbrant, J. (Speaker), Aits, S. (Speaker), Klang, M. (Speaker), Oskolkov, N. (Speaker), Frid, J. (Speaker), Björkelund, A. (Speaker) & Sikström, S. (Speaker)
2019 Nov 8Activity: Participating in or organising an event › Organisation of public lecture/debate/seminar
Infrastructure
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National Bioinformatics Infrastructure Sweden
Ahrén, D. (Manager), Ringnér, M. (Manager), Levander, F. (Manager), Manoharan, L. (Manager), Oskolkov, N. (Manager), Vasquez, L. J. A. (Manager), Pyl, P. T. (Manager), Agarwal, P. (Manager), Li, Y. (Manager), Volpe, M. (Manager) & Kozjek, K. (Manager)
Department of BiologyInfrastructure