Research output per year
Research output per year
Personal profile
Research
Understanding and therapeutic targeting of lysosome-dependent cell death
- Deciphering the molecular machinery of lysosome-dependent cell death and its interactions with other cell death and survival processes
- Understanding the role of lysosome-dependent cell death in diseases with excessive or inhibited cell death
- Therapeutic modulation of lysosome-dependent cell death
- Development of novel tools and methods for studying lysosome-dependent cell death
Artificial intelligence applications in biomedical science
- Use of artificial intelligence for biomedical image analysis
- Use of artificial intelligence for biomedical text mining
- Use of artificial intelligence for protein function and structure prediction and modelling
- Use of artificial intelligence for integrating biomedical "big data" such as proteomics and genomics datasets
Besides these core areas I am also involved in collaborations related to cell death, lysosomes and artificial intelligence.
I am also part of several local and international research networks:
- NEUBIAS European Bioimage Analysis Network
- TRANSAUTOPHAGY
- Nordic Autophagy Society
- StrokeSyd
- AIML@LU
- BioCARE
- LINXS (member of AI/Biocompute working group)
- eHealth@LU
- NeuroLund
- COMPUTE
- eSSENCE
UKÄ subject classification
- Neurosciences
- Cell and Molecular Biology
- Bioinformatics and Systems Biology
- Biochemistry and Molecular Biology
- Other Basic Medicine
Keywords
- Cell death
- Lysosome
- Apoptosis
- High-content microscopy
- Functional genomics
- Image analysis
- Microscopy
- Mitochondria
- Screening
- Bioinformatics
- Neuroscience
- Cancer biology
- Autophagy
- Phenotypic screening
- Neurodegeneration
- Artificial Intelligence
- Machine learning
- Computational modelling
- Computer vision
- Deep learning
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Network
Recent external collaboration on country/territory level. Dive into details by clicking on the dots or
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Yttrande över Europeiska kommissionens förslag till förordning om harmoniserade regler för artificiell intelligens
Axhamn, J., Larsson, S., Dutceac Segesten, A., Aits, S., Hedlund, M., Åström, K. & Wisbrant, J., 2021 Jun 24, 13 p. Lund University.Research output: Other contribution › Miscellaneous › Research
Open AccessFile125 Downloads (Pure) -
English dictionaries, gold and silver standard corpora for biomedical natural language processing related to SARS-CoV-2 and COVID-19
Kazemi Rashed, S., Frid, J., Lim, J. C. & Aits, S., 2020 Mar 22, arXiv.org.Research output: Other contribution › Miscellaneous › Research
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Methods to Detect Loss of Lysosomal Membrane Integrity
Aits, S., 2019 Jan, Autophagy: Methods and Protocols. Ktistakis, N. & Florey, O. (eds.). New York: Humana Press, Vol. 1880. p. 315-329 (Methods in Molecular Biology).Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
3 Citations (SciVal) -
Discovery of Small Molecules That Induce Lysosomal Cell Death in Cancer Cell Lines Using an Image-Based Screening Platform
Pagliero, R. J., D'Astolfo, D. S., Lelieveld, D., Pratiwi, R. D., Aits, S., Jaattela, M., Martin, N. I., Klumperman, J. & Egan, D. A., 2016 Oct 1, In: Assay and Drug Development Technologies. 14, 8, p. 489-510Research output: Contribution to journal › Article › peer-review
10 Citations (SciVal) -
Methods for the quantification of lysosomal membrane permeabilization: A hallmark of lysosomal cell death
Aits, S., Jäättelä, M. & Nylandsted, J., 2015, Lysosomes and Lysosomal Diseases. Platt, F. & Platt, N. (eds.). Vol. 126. p. 261-285 (Methods in Cell Biology).Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
43 Citations (SciVal)
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Artificial intelligence-based text mining for COVID-19
Aits, S., Frid, J., Nugues, P., Kazemi Rashed, S., Lim, J. C. & Klang, M.
2020/01/20 → …
Project: Research
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Biomedical text mining for systems biology
Aits, S., Nugues, P., Ohlsson, M., Frid, J. & Klang, M.
2019/04/01 → …
Project: Research
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Analysing large-scale microscopy datasets with AI-based approaches
Aits, S., Åström, K., Maad Sasane, S., Oskolkov, N., Simpson, K., Kazemi Rashed, S., Lim, J. C. & Wählby, C.
2018/11/28 → …
Project: Research
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Activities
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AI4MedLife
Ellen Tolestam Heyman (Participant) & Sonja Aits (Organiser)
2021 Apr 8Activity: Participating in or organising an event › Participation in workshop/ seminar/ course
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Internetdagarna 2021
Stefan Larsson (Chair), Jonas Wisbrant (Organiser), Kalle Åström (Organiser), Sonja Aits (Organiser), Markus Lingman (Invited speaker), Erik Renström (Contributor), Dalia Mukhtar-Landgren (Invited speaker), Martin Güll (Invited speaker), Anna Felländer (Invited speaker), Johan Axhamn (Invited speaker), Mats Snäll (Participant), Kristin Lilieqvist (Presenter) & Kristina Lång (Invited speaker)
2021 Nov 22Activity: Participating in or organising an event › Participation in conference
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SRA workshop series: Future-oriented methodologies with focus on artificial intelligence (AI) related to SDG´s
Cerina Wittbom (Organiser), Helen Avery (Organiser), Oxana Smirnova (Host), Pia Berntsson (Host), Sonja Aits (Invited speaker), Kajsa M Paulsson (Invited speaker) & Anna-Karin Wihlborg (Session chair)
2021 May 31Activity: Participating in or organising an event › Organisation of workshop/ seminar/ course