Biomedical text mining for systems biology

Aits, Sonja (Researcher)
Nugues, Pierre (PI)
Frid, Johan (Researcher)
Klang, Marcus (Researcher)
Ahmed, Rafsan (Researcher)
Kazemi Rashed, Salma (Researcher)

Project: Research

Status	Active
Effective start/end date	2019/04/01 → …

2 Miscellaneous
2 Preprint (in preprint archive)

EasyNER: A Customizable Easy-to-Use Pipeline for Deep Learning- and Dictionary-based Named Entity Recognition from Medical Text
Ahmed, R., Berntsson, P., Skafte, A., Kazemi Rashed, S., Klang, M., Barvesten, A., Olde, O., Lindholm, W., Lamarca Arrizabalaga, A., Nugues, P. & Aits, S., 2023 Apr 16, arXiv.org.
Research output: Working paper/Preprint › Preprint (in preprint archive)
Files and code for English dictionaries, gold and silver standard corpora for biomedical natural language processing related to SARS-CoV-2 and COVID-19: Dataset record
Kazemi Rashed, S., Ahmed, R., Frid, J. & Aits, S., 2022 Jun 14, Zenodo.
Research output: Other contribution › Miscellaneous › Research

Open Access
Artificial intelligence: — a vehicle or an obstacle on our path to a sustainable future?
Aits, S., 2022 Apr 15, Medium.
Research output: Other contribution › Miscellaneous › Popular science

2 Finished
3 Active

Using artificial intelligence and advanced computational tools to identify biological pathways, disease mechanisms and therapeutic opportunities
Kazemi Rashed, S. (Research student) & Aits, S. (Supervisor)
2020/04/01 → …
Project: Dissertation
Artificial intelligence-based text mining for COVID-19 and other areas of medicine
Aits, S. (PI), Frid, J. (Researcher), Nugues, P. (CoI), Kazemi Rashed, S. (Research student), Klang, M. (Researcher) & Berg, J. (Researcher)
Knut and Alice Wallenberg Foundation
2020/01/20 → …
Project: Research
Environmental toxins as cause of lysosomal damage-induced cell death in animals and humans
Aits, S. (PI), Kazemi Rashed, S. (Research student) & Ahmed, R. (Research student)
FORMAS, The Swedish Research Council for Environment, Agricultural Sciences and Spatial Planning
2020/01/01 → …
Project: Research

1 Media participation
1 Invited talk

Fråga Lund - segment on ChatGPT and AI
Aits, S. (Role not specified)
2023 Oct 23
Activity: Other › Media participation
AI in research: ChatGPT and more
Aits, S. (Role not specified)
2023 Aug 22
Activity: Talk or presentation › Invited talk