Genetic and Environmental Factors in Cardiometabolic Risk

Yan Chen

Research output: ThesisDoctoral Thesis (monograph)

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Abstract

Abstract: Cardiovascular diseases and diabetes mellitus are closely linked by sharing common risk factors, such as obesity, insulin resistance, hypertension and dyslipidaemia. These intermediate risk factors are affected by the joint effects of environment and genetics. Although a multitude of studies aimed to disentangle the effects of gene-environment interactions, many of the published gene-environment interaction analyses are inadequately powered and lack replication due to the small magnitude of interaction effect sizes. Meanwhile, many more potential gene-environment interactions affecting cardiometabolic risk are yet to be discovered. This thesis investigated the role of genetic and environmental factors in a range of cardiometabolic traits (e.g. body mass index (BMI), blood lipids, and blood pressure), using three complementary study designs. In Paper I, two Swedish cohorts, the Gene-Lifestyle Interactions and Complex Traits Involved in Elevated Disease Risk Study (GLACIER, N=4902) and the Malmö Diet and Cancer Study (MDCS, N=21,824) were analyzed. In the meta-analysis, a nominally significant interaction (Pint=0.03) was observed between sugar sweetened beverage (SSB) intake and a genetic risk score based on BMI related single nucleotide polymorphisms (SNPs). With SSB consumption defined as four categories, one SSB intake category increase was associated with 0.18 kg/m2 mean change of BMI (P= 1.7×10-20; n = 26,726). In Paper II, interactions between dietary polyunsaturated fatty acid (PUFA) intake and variation at the fatty acid desaturase (FADS) gene cluster were investigated in the GLACIER cohort (N=5,160). In summary, SNP-, haplotype-, and gene-level interaction signals were observed in relation to serum triglyceride concentrations. Through functional annotation, the FADS2 rs5792235 SNP was identified as the probable causal variant in the region (owing to its high functionality score). In Paper III, using repeated-measures data from >18,000 adults in a subcohort of the Västerbotten Health Survey, an environment-wide association study (EWAS) was performed employing linear mixed-models, assuming different intercepts for each individual. A varying number (12-75) of exposure variables showed environmental-wide-significant associations with nine cardiometabolic traits. For the first time, we showed that heptadecanoic acid (C17:0) is strongly associated with a range of cardiometabolic traits. In conclusion, in this thesis I report novel and confirmatory evidence of environmental risk factors, as well as gene-environment interactions for major intermediate cardiometabolic risk factors.
Original languageEnglish
QualificationDoctor
Awarding Institution
  • Department of Clinical Sciences, Malmö
Supervisors/Advisors
  • Franks, Paul, Supervisor
  • Kurbasic, Azra, Assistant supervisor
  • Poveda, Alaitz, Assistant supervisor
Award date2018 Dec 17
Place of PublicationLund
Publisher
Print ISBNs978-91-7619-724-0
Publication statusPublished - 2018

Bibliographical note

Defence details
Date: 2018-12-17
Time: 09:00
Place: Aulan, CRC, Jan Waldenströms gata 35, Skånes Universitetssjukhus i Malmö
External reviewer(s)
Name: Ma, Roland CW
Title: professor
Affiliation: The Chinese University of Hong Kong

Subject classification (UKÄ)

  • Medical and Health Sciences

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