CADEE: Computer-Aided Directed Evolution of Enzymes

Beat Anton Amrein; Fabian Steffen-Munsberg; Ireneusz Szeler; Miha Purg; Yashraj Kulkarni; Shina Caroline Lynn Kamerlin

doi:10.1107/S2052252516018017

CADEE: Computer-Aided Directed Evolution of Enzymes

Beat Anton Amrein, Fabian Steffen-Munsberg, Ireneusz Szeler, Miha Purg, Yashraj Kulkarni, Shina Caroline Lynn Kamerlin

Uppsala University

Research output: Contribution to journal › Article › peer-review

Abstract

The tremendous interest in enzymes as biocatalysts has led to extensive work in enzyme engineering, as well as associated methodology development. Here, a new framework for computer-aided directed evolution of enzymes (CADEE) is presented which allows a drastic reduction in the time necessary to prepare and analyze in silico semi-automated directed evolution of enzymes. A pedagogical example of the application of CADEE to a real biological system is also presented in order to illustrate the CADEE workflow.

Original language	English
Pages (from-to)	50-64
Number of pages	15
Journal	IUCrJ
Volume	4
Issue number	Pt 1
DOIs	https://doi.org/10.1107/S2052252516018017
Publication status	Published - 2017 Jan 1
Externally published	Yes

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AU - Kulkarni, Yashraj

AU - Kamerlin, Shina Caroline Lynn

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CADEE: Computer-Aided Directed Evolution of Enzymes

Abstract

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