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Abstract
A maximum likelihood methodology for the parameters of models with an intractable likelihood is introduced. We produce a likelihood-free version of the stochastic approximation expectation-maximization (SAEM) algorithm to maximize the likelihood function of model parameters. While SAEM is best suited for models having a tractable "complete likelihood" function, its application to moderately complex models is a difficult or even impossible task. We show how to construct a likelihood-free version of SAEM by using the "synthetic likelihood" paradigm. Our method is completely plug-and-play, requires almost no tuning and can be applied to both static and dynamic models. Four simulation studies illustrate the method, including a stochastic differential equation model, a stochastic Lotka-Volterra model and data from g-and-k distributions. MATLAB code is available as supplementary material.
Original language | English |
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Pages (from-to) | 861-881 |
Number of pages | 26 |
Journal | Communications in Statistics: Simulation and Computation |
Volume | 48 |
Issue number | 3 |
Early online date | 2018 Jan 18 |
DOIs | |
Publication status | Published - 2019 |
Subject classification (UKÄ)
- Probability Theory and Statistics
Keywords
- maximum likelihood
- SAEM
- sequential Monte Carlo
- synthetic likelihood;
- state space model
- Stochastic differential equation
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Dive into the research topics of 'Likelihood-free stochastic approximation EM for inference in complex models'. Together they form a unique fingerprint.Projects
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Stochastic modelling of protein folding and likelihood-free statistical inference methods
Picchini, U., Forman, J., Lindorff-Larsen, K. & Wiqvist, S.
2015/01/01 → …
Project: Research