TY - GEN
T1 - Molecular docking analysis of ahl molecule on plant protein arr10
AU - Basu, Anamika
AU - Sarkar, Anasua
PY - 2015/1/1
Y1 - 2015/1/1
N2 - In rhizosphere Plant Growth Promoting Rhizobacteria (PGPR) produce N-acyl-l-homoserine lactones (AHL) as the quorum-sensing (QS) signals. AHLs can act as trans-kingdom signalling molecules between plants and rhizobacteria and that can regulate plant growth and development. The plant-beneficial PGPR Burkholderia phytofirmans PsJN promotes growth in Arabidopsis thaliana by producing 3-oxo-dodecanoyl homoserine lactone (oxo-C14-HSL) from their quorum-sensing (QS) system. In bacteria, QS system functions by binding AHL to the LuxR-family of sensor/regulator proteins through their response regulator receiver domain. It has been hypothesized that by using similar response domain, Arabidopsis response regulator 10 (ARR10) proteins may act as binding site for 3-oxo-dodecanoyl homoserine lactone. ARRs are involved in cytokinin signalling pathways and thus these types of lactones can regulate growth in Arabidopsis. We prove the binding of oxo-C14-HSL with ARR10 by using molecular docking technique and analysing the docking result.
AB - In rhizosphere Plant Growth Promoting Rhizobacteria (PGPR) produce N-acyl-l-homoserine lactones (AHL) as the quorum-sensing (QS) signals. AHLs can act as trans-kingdom signalling molecules between plants and rhizobacteria and that can regulate plant growth and development. The plant-beneficial PGPR Burkholderia phytofirmans PsJN promotes growth in Arabidopsis thaliana by producing 3-oxo-dodecanoyl homoserine lactone (oxo-C14-HSL) from their quorum-sensing (QS) system. In bacteria, QS system functions by binding AHL to the LuxR-family of sensor/regulator proteins through their response regulator receiver domain. It has been hypothesized that by using similar response domain, Arabidopsis response regulator 10 (ARR10) proteins may act as binding site for 3-oxo-dodecanoyl homoserine lactone. ARRs are involved in cytokinin signalling pathways and thus these types of lactones can regulate growth in Arabidopsis. We prove the binding of oxo-C14-HSL with ARR10 by using molecular docking technique and analysing the docking result.
KW - 3-oxo-C14-Homo serine lactones
KW - Arabidopsis response regulator 10 (ARR10) proteins
KW - Burkholderia phytofirmans PsJN
KW - Molecular docking
KW - N-acyl-l-homoserine lactones
KW - Plant growth promoting rhizobacteria
KW - Response regulator receiver domain
U2 - 10.1007/978-81-322-2247-7_20
DO - 10.1007/978-81-322-2247-7_20
M3 - Paper in conference proceeding
AN - SCOPUS:84921942597
T3 - Advances in Intelligent Systems and Computing
SP - 187
EP - 193
BT - Information Systems Design and Intelligent Applications - Proceedings of 2nd International Conference, INDIA 2015
A2 - Mandal, J.K.
A2 - Satapathy, Suresh Chandra
A2 - Sanyal, Manas Kumar
A2 - Sarkar, Partha Pratim
A2 - Mukhopadhyay, Anirban
PB - Springer
T2 - 2nd International Conference on Information Systems Design and Intelligent Applications, INDIA 2015
Y2 - 8 January 2015 through 9 January 2015
ER -