Biochemistry, 0006-2960

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  1. 2019
  2. Crystal Structure and Substrate Specificity of the 8-oxo-dGTP Hydrolase NUDT1 from Arabidopsis thaliana

    Jemth, A. S., Emma Scaletti, Carter, M., Helleday, T. & Pål Stenmark, 2019, In : Biochemistry. 58, 7, p. 887-899 13 p.

    Research output: Contribution to journalArticle

  3. Improving the Developability of an Antigen Binding Fragment by Aspartate Substitutions

    Laila I Sakhnini, Greisen, P. J., Wiberg, C., Bozoky, Z., Lund, S., Wolf Perez, A-M., Karkov, H. S., Huus, K., Hansen, J-J., Leif Bülow, Lorenzen, N., Dainiak, M. B. & Pedersen, A. K., 2019, In : Biochemistry. 58, 24, p. 2750-2759

    Research output: Contribution to journalArticle

  4. 2018
  5. Conformational Entropy of FK506 Binding to FKBP12 Determined by Nuclear Magnetic Resonance Relaxation and Molecular Dynamics Simulations

    Solomentsev, G., Diehl, C. & Mikael Akke, 2018 Mar 6, In : Biochemistry. 57, 9, p. 1451-1461 11 p.

    Research output: Contribution to journalArticle

  6. Structural and Biophysical Characterization of Human EXTL3: Domain Organization, Glycosylation, and Solution Structure

    Awad, W., Sven Kjellström, Svensson Birkedal, G., Katrin Mani & Derek T. Logan, 2018 Feb 20, In : Biochemistry. 57, 7, p. 1166-1177 12 p.

    Research output: Contribution to journalArticle

  7. Crystal Structures and Inhibitor Interactions of Mouse and Dog MTH1 Reveal Species-Specific Differences in Affinity

    Narwal, M., Jemth, A-S., Gustafsson, R., Almlöf, I., Warpman Berglund, U., Helleday, T. & Pål Stenmark, 2018 Feb 6, In : Biochemistry. 57, 5, p. 593-603

    Research output: Contribution to journalArticle

  8. Extracellular Electron Transfer by the Gram-positive Bacterium Enterococcus faecalis

    Galina Pankratova, Leech, D., Lo Gorton & Lars Hederstedt, 2018, In : Biochemistry. 57, p. 4597-4603

    Research output: Contribution to journalArticle

  9. 2017
  10. Aggregation and Fibril Structure of AβM01-42 and Aβ1-42

    Silvers, R., Colvin, M. T., Frederick, K. K., Jacavone, A. C., Lindquist, S., Sara Linse & Griffin, R. G., 2017 Sep 12, In : Biochemistry. 56, 36, p. 4850-4859 10 p.

    Research output: Contribution to journalArticle

  11. Dynamics of Aromatic Side Chains in the Active Site of FKBP12

    Weininger, U., Kristofer Modig, Geitner, A. J., Schmidpeter, P. A. M., Koch, J. R. & Mikael Akke, 2017 Jan 10, In : Biochemistry. 56, 1, p. 334-343 10 p.

    Research output: Contribution to journalArticle

  12. 2016
  13. The Aggregation Paths and Products of Aβ42 Dimers Are Distinct from Those of the Aβ42 Monomer

    O'Malley, T. T., Witbold, W. M., Sara Linse & Walsh, D. M., 2016 Nov 8, In : Biochemistry. 55, 44, p. 6150-6161 12 p.

    Research output: Contribution to journalArticle

  14. Structural Insights into the Calcium-Mediated Allosteric Transition in the C-Terminal Domain of Calmodulin from Nuclear Magnetic Resonance Measurements.

    Kukic, P., Lundström, P., Camilloni, C., Evenäs, J., Mikael Akke & Vendruscolo, M., 2016, In : Biochemistry. 55, 1, p. 19-28

    Research output: Contribution to journalArticle

  15. 2015
  16. Neutron Crystallographic Studies Reveal Hydrogen Bond and Water-Mediated Interactions between a Carbohydrate-Binding Module and Its Bound Carbohydrate Ligand.

    Fisher, Z., von Schantz, L., Håkansson, M., Derek Logan & Mats Ohlin, 2015, In : Biochemistry. 54, 42, p. 6435-6438

    Research output: Contribution to journalArticle

  17. Structure and Function of Cu(I)- and Zn(II)-ATPases

    Sitsel, O., Gronberg, C., Autzen, H. E., Wang, K., Meloni, G., Nissen, P. & Pontus Gourdon, 2015, In : Biochemistry. 54, 37, p. 5673-5683

    Research output: Contribution to journalArticle

  18. 2014
  19. 2013
  20. Amino Acid Oxidation of Candida antarctica Lipase B Studied by Molecular Dynamics Simulations and Site-Directed Mutagenesis

    Irani, M., Törnvall, U., Genheden, S., Wittrup Larsen, M., Rajni Hatti-Kaul & Ulf Ryde, 2013, In : Biochemistry. 52, 7, p. 1280-1289

    Research output: Contribution to journalArticle

  21. Double Electron-Electron Resonance Probes Ca2+-Induced Conformational Changes and Dimerization of Recoverin

    Myers, W. K., Xu, X., Li, C., Jens Lagerstedt, Budamagunta, M. S., Voss, J. C., Britt, R. D. & Ames, J. B., 2013, In : Biochemistry. 52, 34, p. 5800-5808

    Research output: Contribution to journalArticle

  22. The BRICHOS Domain, Amyloid Fibril Formation, and Their Relationship

    Knight, S. D., Presto, J., Sara Linse & Johansson, J., 2013, In : Biochemistry. 52, 43, p. 7523-7531

    Research output: Contribution to journalArticle

  23. 2012
  24. Calcium-Dependent Interaction of Calmodulin with Human 80S Ribosomes and Polyribosomes.

    Behnen, P., Davis, E., Delaney, E., Frohm, B., Bauer, M., Tommy Cedervall, O'Connell, D., Akerfeldt, K. S. & Sara Linse, 2012, In : Biochemistry. 51, 34, p. 6718-6727

    Research output: Contribution to journalArticle

  25. Specific Binding of a beta-Cyclodextrin Dimer to the Amyloid beta Peptide Modulates the Peptide Aggregation Process

    Wahlstrom, A., Cukalevski, R., Danielsson, J., Jarvet, J., Onagi, H., Rebek, J. J., Sara Linse & Graslund, A., 2012, In : Biochemistry. 51, 21, p. 4280-4289

    Research output: Contribution to journalArticle

  26. The Carbohydrate-Binding Site in Galectin-3 Is Preorganized To Recognize a Sugarlike Framework of Oxygens: Ultra-High-Resolution Structures and Water Dynamics

    Kadhirvel, S., Håkansson, M., Genheden, S., Diehl, C., Qvist, J., Weininger, U., Ulf Nilsson, Hakon Leffler, Ulf Ryde, Mikael Akke & Derek Logan, 2012, In : Biochemistry. 51, 1, p. 296-306

    Research output: Contribution to journalArticle

  27. 2011
  28. NMR-Derived Models of Amidopyrine and Its Metabolites in Complexes with Rabbit Cytochrome P450 2B4 Reveal a Structural Mechanism of Sequential N-Dealkylation

    Roberts, A. G., Sara Sjögren, Fomina, N., Vu, K. T., Almutairi, A. & Halpert, J. R., 2011, In : Biochemistry. 50, 12, p. 2123-2134

    Research output: Contribution to journalArticle

  29. The activity of barley NADPH-dependent thioredoxin reductase C is independent of the oligomeric state of the protein: tetrameric structure determined by cryo-electron microscopy

    Peterson Wulff, R., Lundqvist, J., Rutsdottir, G., Hansson, A., Stenbaek, A., Elmlund, D., Elmlund, H., Jensen, P. E. & Mats Hansson, 2011, In : Biochemistry. 50, 18, p. 3713-3723

    Research output: Contribution to journalArticle

  30. The Crystal Structure of Streptococcus pyogenes Uridine Phosphorylase Reveals a Distinct Subfamily of Nucleoside Phosphorylases

    Tran, T. H., Christoffersen, S., Allan, P. W., Parker, W. B., Piskur, J., Serra, I., Terreni, M. & Ealick, S. E., 2011, In : Biochemistry. 50, 30, p. 6549-6558

    Research output: Contribution to journalArticle

  31. The Structural Role of N-Linked Glycans on Human Glypican-1

    Svensson Birkedal, G., Wittsten, A. H., Sara Linse & Katrin Mani, 2011, In : Biochemistry. 50, 43, p. 9377-9387

    Research output: Contribution to journalArticle

  32. 2010
  33. Monovalent Interactions of Galectin-1

    Salomonsson, E., Larumbe, A., Tejler, J., Tullberg, E., Rydberg, H., Sundin, A., Khabut, A., Torbjörn Frejd, Lobsanov, Y., Rini, J. M., Ulf Nilsson & Hakon Leffler, 2010, In : Biochemistry. 49, 44, p. 9518-9532

    Research output: Contribution to journalArticle

  34. Rational Engineering of Mannosyl Binding in the Distal Glycone Subsites of Cellulomonas fimi Endo-beta-1,4-mannanase: Mannosyl Binding Promoted at Subsite-2 and Demoted at Subsite-3

    Hekmat, O., Lo Leggio, L., Rosengren, A., Kamarauskaite, J., Kolenová, K. & Henrik Stålbrand, 2010, In : Biochemistry. 49, 23, p. 4884-4896

    Research output: Contribution to journalArticle

  35. Understanding the Molecular Activity of Alkaline Sphingomyelinase (NPP7) by Computer Modeling

    Duan, J., Wu, J., Cheng, Y. & Rui-Dong Duan, 2010, In : Biochemistry. 49, 42, p. 9096-9105

    Research output: Contribution to journalArticle

  36. 2009
  37. The M17 leucine aminopeptidase of the malaria parasite Plasmodium falciparum: importance of active site metal ions in the binding of substrates and inhibitors

    Selma Maric, Donnelly, S. M., Robinson, M. W., Skinner-Adams, T., Trenholme, K. R., Gardiner, D. L., Dalton, J. P., Stack, C. M. & Lowther, J., 2009 Jun 16, In : Biochemistry. 48, 23, p. 5435-9 5 p.

    Research output: Contribution to journalArticle

  38. Molecular mechanisms controlling phosphate-induced downregulation of the yeast Pho84 phosphate transporter

    Lundh, F., Mouillon, J-M., Samyn, D., Stadler, K., Popova, Y., Jens O Lagerstedt, Thevelein, J. M. & Persson, B. L., 2009 Jun 2, In : Biochemistry. 48, 21, p. 4497-505 9 p.

    Research output: Contribution to journalArticle

  39. Chemical and Thermal Unfolding of Glypican-1: Protective Effect of Heparan Sulfate against Heat-Induced Irreversible Aggregation

    Svensson Birkedal, G., Sara Linse & Katrin Mani, 2009, In : Biochemistry. 48, 42, p. 9994-10004

    Research output: Contribution to journalArticle

  40. 2008
  41. A double role for a strictly conserved serine: Further insights into the dUTPase catalytic mechanism

    Palmen, L. G., Becker, K., Leif Bülow & Kvassman, J-O., 2008, In : Biochemistry. 47, 30, p. 7863-7874

    Research output: Contribution to journalArticle

  42. Calmodulin Binding to the Polybasic C-Termini of STIM Proteins Involved in Store-Operated Calcium Entry.

    Bauer, M., O'Connell, D., Cahill, D. & Sara Linse, 2008, In : Biochemistry. 47, 23, p. 6089-6091

    Research output: Contribution to journalArticle

  43. Effects of Metal-Binding Loop Mutations on Ligand Binding to Calcium- and Integrin-Binding Protein 1. Evolution of the EF-Hand?

    Yamniuk, A., Gifford, J., Sara Linse & Vogel, H., 2008, In : Biochemistry. 47, 6, p. 1696-1707

    Research output: Contribution to journalArticle

  44. EPR Characterization of Photosystem II from Different Domains of the Thylakoid Membrane.

    Mamedov, F., Danielsson, R., Gadjieva, R., Albertsson, P-Å. & Styring, S., 2008, In : Biochemistry. 47, 12, p. 3883-3891

    Research output: Contribution to journalArticle

  45. Rational design of antimicrobial C3a analogues with enhanced effects against Staphylococci using an integrated structure and function-based approach.

    Pasupuleti, M., Walse, B., Svensson, B., Malmsten, M. & Artur Schmidtchen, 2008, In : Biochemistry. 47, 35, p. 9057-9070

    Research output: Contribution to journalArticle

  46. Structural basis of the iron storage function of frataxin from single-particle reconstruction of the iron-loaded oligomer

    Schagerlöf, U., Elmlund, H., Gakh, O., Nordlund, G., Hebert, H., Lindahl, M., Isaya, G. & Salam Al-Karadaghi, 2008, In : Biochemistry. 47, 17, p. 4948-4954

    Research output: Contribution to journalArticle

  47. The structures of human dihydroorotate dehydrogenase with and without inhibitor reveal conformational flexibility in the inhibitor and substrate binding sites.

    Walse, B., Tamu Dufe, V., Svensson, B., Fritzson, I., Dahlberg, L., Khairoullina, A., Wellmar, U. & Salam Al-Karadaghi, 2008, In : Biochemistry. 47, 34, p. 8929-8936

    Research output: Contribution to journalArticle

  48. 2007
  49. Mapping the structural transition in an amyloidogenic apolipoprotein A-I

    Jens O Lagerstedt, Cavigiolio, G., Roberts, L. M., Hong, H-S., Jin, L-W., Fitzgerald, P. G., Oda, M. N. & Voss, J. C., 2007 Aug 28, In : Biochemistry. 46, 34, p. 9693-9

    Research output: Contribution to journalArticle

  50. Amino acid residues His183 and Glu264 in Bacillus subtilis ferrochelatase direct and facilitate the insertion of metal ion into protoporphyrin IX

    Hansson, M., Karlberg, T., Rahardja, M. A., Salam Al-Karadaghi & Mats Hansson, 2007, In : Biochemistry. 46, 1, p. 87-94

    Research output: Contribution to journalArticle

  51. Low-light-induced formation of semicrystalline photosystem II arrays in higher plant chloroplast

    Kirchhoff, H., Haase, W., Wegner, S., Danielsson, R., Ackermann, R. & Albertsson, P-Å., 2007, In : Biochemistry. 46, 39, p. 11169-11176

    Research output: Contribution to journalArticle

  52. Prediction and rationalization of the pH dependence of the activity and stability of family 11 xylanases

    Kongsted, J., Ulf Ryde, Wydra, J. & Jensen, J. H., 2007, In : Biochemistry. 46, 47, p. 13581-13592

    Research output: Contribution to journalArticle

  53. Structural characterization of the ribosomal P1A-P2B protein dimer by small-angle X-ray scattering and NMR spectroscopy

    Grela, P., Helgstrand, M., Krokowski, D., Boguszewska, A., Svergun, D., Anders Liljas, Bernado, P., Grankowski, N., Mikael Akke & Tchorzewski, M., 2007, In : Biochemistry. 46, 7, p. 1988-1998

    Research output: Contribution to journalArticle

  54. Structural evidence for a ligand coordination switch in liver alcohol dehydrogenase

    Meijers, R., Adolph, H-W., Dauter, Z., Wilson, K. S., Lamzin, V. S. & Cedergren, E., 2007, In : Biochemistry. 46, 18, p. 5446-5454

    Research output: Contribution to journalArticle

  55. 2006
  56. A Single gamma-Carboxyglutamic Acid Residue in a Novel Cysteine-Rich Secretory Protein without Propeptide(,).

    Hansson, K. M., Thämlitz, A-M., Furie, B., Furie, B. & Johan Stenflo, 2006, In : Biochemistry. 45, 42, p. 12828-12839

    Research output: Contribution to journalArticle

  57. Binding of calcium to anticoagulant protein S: role of the fourth EGF module.

    Kristina Persson, Johan Stenflo, Sara Linse, Stenberg, Y., Preston, R. J. S., Lane, D. A. & Rezende, S. M., 2006, In : Biochemistry. 45, 35, p. 10682-10689

    Research output: Contribution to journalArticle

  58. Conformational cycling in beta-phosphoglucomutase catalysis: Reorientation of the beta-D-glucose 1,6-(bis) phosphate intermediate

    Dai, JY., Wang, LB., Allen, KN., Peter Rådström & Dunaway-Mariano, D., 2006, In : Biochemistry. 45, 25, p. 7818-7824

    Research output: Contribution to journalArticle

  59. Electrostatic contributions to residue-specific protonation equilibria and proton binding capacitance for a small protein

    Lindman, S., Sara Linse, Mulder, F. & Ingemar André, 2006, In : Biochemistry. 45, 47, p. 13993-14002

    Research output: Contribution to journalArticle

  60. Energy transfer in the major intrinsic light-harvesting complex from Amphidinium carterae

    Polivka, T., van Stokkum, I. H. M., Donatas Zigmantas, van Grondelle, R., Villy Sundström & Hiller, R. G., 2006, In : Biochemistry. 45, 28, p. 8516-8526

    Research output: Contribution to journalArticle

  61. Residues from transmembrane helices 3 and 5 participate in leukotriene B-4 binding to BLT1

    Sabirsh, A., Bywater, RP., Bristulf, J., Owman, C. & Haeggstrom, JZ., 2006, In : Biochemistry. 45, 18, p. 5733-5744

    Research output: Contribution to journalArticle

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