Journal of Proteome Research, 1535-3893

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  1. 2002
  2. 2003
  3. Automating gel image acquisition

    Bäck, P., Nagard, F., Bolmsjö, G., Sofia Waldemarson & Peter James, 2003, In : Journal of Proteome Research. 2, 6, p. 662-664

    Research output: Contribution to journalArticle

  4. Structural analysis of 2D-gel-separated glycoproteins from human cerebrospinal fluid by tandem high-resolution mass spectrometry

    Håkansson, K., Emmett, M. R., Marshall, A. G., Davidsson, P. & Carol L Nilsson, 2003 Dec 25, In : Journal of Proteome Research. 2, 6, p. 581-8 8 p.

    Research output: Contribution to journalArticle

  5. 2004
  6. Exploring the context of the lung proteome within the airway mucosa following allergen challenge.

    Fehniger, T. E., Sato-Folatre, J-G., Johan Malmström, Berglund, M., Lindberg, C., Brange, C., Lindberg, H. & Marko-Varga, G., 2004, In : Journal of Proteome Research. 3, 2, p. 307-320

    Research output: Contribution to journalReview article

  7. Integrated protein microchip assay with dual fluorescent- and MALDI read-out

    Finnskog, D., Ressine, A., Thomas Laurell & György Marko-Varga, 2004, In : Journal of Proteome Research. 3, 5, p. 988-994

    Research output: Contribution to journalArticle

  8. Linking proteins to disease processes

    György Marko-Varga & Fehniger, T. E., 2004, In : Journal of Proteome Research. 3, 2, p. 155-155

    Research output: Contribution to journalDebate/Note/Editorial

  9. Proteome annotations and identifications of the human pulmonary fibroblast.

    Johan Malmström, Larsen, K., Lars Malmström, Ellen Tufvesson, Parker, K., Marchese, J., Williamson, B., Hattan, S., Patterson, D., Martin, S., Graber, A., Juhasz, H. P., Gunilla Westergren-Thorsson & György Marko-Varga, 2004, In : Journal of Proteome Research. 3, 3, p. 525-537

    Research output: Contribution to journalArticle

  10. Proteomics and disease - The challenges for technology and discovery

    György Marko-Varga & Fehniger, TE., 2004, In : Journal of Proteome Research. 3, 2, p. 167-178

    Research output: Contribution to journalArticle

  11. Proteomics and leukocytes: an approach to understanding potential molecular mechanisms of inflammatory responses.

    Wang, X., Zhao, H. & Roland Andersson, 2004, In : Journal of Proteome Research. 3, 5, p. 921-929

    Research output: Contribution to journalReview article

  12. 2005
  13. Automated PreScan function for scanning fluorescently stained 2D-PAGE gels

    Bäck, P., Sofia Waldemarson & Peter James, 2005, In : Journal of Proteome Research. 4, 5, p. 1511-1515

    Research output: Contribution to journalArticle

  14. Discovery of Biomarker Candidates within Disease by Protein Profiling: Principles and Concepts.

    György Marko-Varga, Lindberg, H., Claes-Göran Löfdahl, Jönsson, P., Hansson, L., Dahlbäck, M., Lindquist, E., Johansson, L., Foster, M. & Fehniger, T., 2005, In : Journal of Proteome Research. 4, 4, p. 1200-1212

    Research output: Contribution to journalArticle

  15. Reproducibility of tryptic digestion investigated by quantitative fourier transform ion cyclotron resonance mass spectrometry

    Hagman, C., Ramstrom, M., Bentz, M., Peter James, Hakansson, P. & Bergquist, J., 2005, In : Journal of Proteome Research. 4, 2, p. 394-399

    Research output: Contribution to journalArticle

  16. The protein expression of Streptococcus pyogenes is significantly influenced by human plasma.

    Johansson, B., Fredrik Levander, von Pawel-Rammingen, U., Berggård, T., Lars Björck & Peter James, 2005, In : Journal of Proteome Research. 4, 6, p. 2302-2311

    Research output: Contribution to journalArticle

  17. Prefractionation of cerebrospinal fluid to enhance glycoprotein concentration prior to structural determination with FT-ICR mass spectrometry

    Sihlbom, C., Davidsson, P. & Carol L Nilsson, 2005 Dec 13, In : Journal of Proteome Research. 4, 6, p. 2294-301 8 p.

    Research output: Contribution to journalArticle

  18. 2006
  19. Aqueous two-phase partitioning for proteomic monitoring of cell surface biomarkers in human peripheral blood mononuclear cells

    Everberg, H., Peterson Wulff, R., Rak, S., Folke Tjerneld & Cecilia Emanuelsson, 2006, In : Journal of Proteome Research. 5, 5, p. 1168-1175

    Research output: Contribution to journalArticle

  20. Comparison of MS/MS methods for protein identification from 2D-PAGE

    Arrigoni, G., Celine Fernandez, Cecilia Holm, Scigelova, M. & Peter James, 2006, In : Journal of Proteome Research. 5, 9, p. 2294-2300

    Research output: Contribution to journalArticle

  21. Detection and identification of protein isoforms using cluster analysis of MALDI-MS mass spectra

    Alm, R., Johansson, P., Hjerno, K., Cecilia Emanuelsson, Markus Ringnér & Jari Häkkinen, 2006, In : Journal of Proteome Research. 5, 4, p. 785-792

    Research output: Contribution to journalArticle

  22. Inflammatory response in white adipose tissue in the non-obese hormone-sensitive lipase null mouse model.

    Ola Hansson, Ström, K., Güner, N., Nils Wierup, Sundler, F., Peter Höglund & Cecilia Holm, 2006, In : Journal of Proteome Research. 5, 7, p. 1701-1710

    Research output: Contribution to journalArticle

  23. Optimized peptide separation and identification for mass spectrometry based proteomics via free-flow electrophoresis

    Johan Malmström, Lee, H., Nesvizhskii, A. I., Shteynberg, D., Mohanty, S., Brunner, E., Ye, M., Weber, G., Eckerskorn, C. & Aebersold, R., 2006 Sep, In : Journal of Proteome Research. 5, 9, p. 2241-9 9 p.

    Research output: Contribution to journalArticle

  24. Characterization of the outer membrane protein profile from disease-related Helicobacter pylori isolates by subcellular fractionation and nano-LC FT-ICR MS analysis

    Carlsohn, E., Nyström, J., Karlsson, H., Svennerholm, A-M. & Carol L Nilsson, 2006 Nov, In : Journal of Proteome Research. 5, 11, p. 3197-204 8 p.

    Research output: Contribution to journalArticle

  25. 2007
  26. Altered chaperone and protein turnover regulators expression in cultured skin fibroblasts from type 1 diabetes mellitus with nephropathy

    Tessari, P., Puricelli, L., Iori, E., Arrigoni, G., Vedovato, M., Peter James, Coracina, C. & Millioni, R., 2007, In : Journal of Proteome Research. 6, 3, p. 976-986

    Research output: Contribution to journalArticle

  27. A probabilistic treatment of the missing spot problem in 2D gel electrophoresis experiments

    Krogh, M., Celine Fernandez, Teilum, M., Bengtsson, S. & Peter James, 2007, In : Journal of Proteome Research. 6, 8, p. 3335-3343

    Research output: Contribution to journalArticle

  28. Automating MALDI Sample Plate Loading

    Andersson, T., Johansson, M., Bolmsjö, G. & Peter James, 2007, In : Journal of Proteome Research. 6, 2, p. 894-896

    Research output: Contribution to journalArticle

  29. Comparative Time-Dependent Analysis of Potential Inflammation Biomarkers in Lymphoma-Bearing SJL Mice.

    Monica Kåredal, Bhat, V., Babu, I., Wishnok, J. & Tannenbaum, S., 2007, In : Journal of Proteome Research. 6, 5, p. 1735-1744

    Research output: Contribution to journalArticle

  30. Design of recombinant antibody microarrays for serum protein profiling: Targeting of complement proteins

    Ingvarsson, J., Larsson, A., Sjöholm, A., Lennart Truedsson, Bo Jansson, Carl Borrebaeck & Christer Wingren, 2007, In : Journal of Proteome Research. 6, 9, p. 3527-3536

    Research output: Contribution to journalArticle

  31. Development of reagents for differential protein quantitation by subtractive parent (precursor) ion scanning

    Wåhlander, Å., Arrigoni, G., Wårell, K., Fredrik Levander, Palmgren, R., Maloisel, J-L., Busson, P. & Peter James, 2007, In : Journal of Proteome Research. 6, 3, p. 1101-1113

    Research output: Contribution to journalArticle

  32. Hypothermia Affects Translocation of Numerous Cytoplasmic Proteins Following Global Cerebral Ischemia.

    Teilum, M., Krogh, M., Tadeusz Wieloch & Gustav Mattiasson, 2007, In : Journal of Proteome Research. 6, 7, p. 2822-2832

    Research output: Contribution to journalArticle

  33. Large-Scale Proteomics Analysis of Human Ovarian Cancer for Biomarkers

    Bengtsson, S., Krogh, M., Al-Khalili Szigyarto, C., Uhlen, M., Schedvins, K., Silfversward, C., Linder, S., Auer, G., Alaiya, A. & Peter James, 2007, In : Journal of Proteome Research. 6, 4, p. 1440-1450

    Research output: Contribution to journalArticle

  34. Proteomic profiling of plasma in Huntington's disease reveals neuroinflammatory activation and biomarker candidates

    Dalrymple, A., Wild, E. J., Joubert, R., Sathasivam, K., Bjorkqvist, M., Åsa Petersén, Jackson, G. S., Isaacs, J. D., Kristiansen, M., Bates, G. P., Leavitt, B. R., Keir, G., Ward, M. & Tabrizi, S. J., 2007, In : Journal of Proteome Research. 6, 7, p. 2833-2840

    Research output: Contribution to journalArticle

  35. Proteomic variation is as large within as between strawberry varieties

    Alm, R., Ekefjard, A., Krogh, M., Jari Häkkinen & Cecilia Emanuelsson, 2007, In : Journal of Proteome Research. 6, 8, p. 3011-3020

    Research output: Contribution to journalArticle

  36. Proteomic investigation of glioblastoma cell lines treated with wild-type p53 and cytotoxic chemotherapy demonstrates an association between galectin-1 and p53 expression

    Puchades, M., Carol L Nilsson, Emmett, M. R., Aldape, K. D., Ji, Y., Lang, F., Liu, T-J. & Conrad, C. A., 2007 Feb, In : Journal of Proteome Research. 6, 2, p. 869-75 7 p.

    Research output: Contribution to journalArticle

  37. 14-3-3 expression in denervated hippocampus after entorhinal cortex lesion assessed by culture-derived isotope tags in quantitative proteomics

    Sihlbom, C., Wilhelmsson, U., Li, L., Carol L Nilsson & Pekny, M., 2007 Sep, In : Journal of Proteome Research. 6, 9, p. 3491-3500 10 p.

    Research output: Contribution to journalArticle

  38. 2008
  39. Design of recombinant antibody microarrays for cell surface membrane proteomics

    Dexlin Mellby, L., Ingvarsson, J., Frendeus, B., Carl Borrebaeck & Christer Wingren, 2008, In : Journal of Proteome Research. 7, 1, p. 319-327

    Research output: Contribution to journalArticle

  40. ENSAM: Europium Nanoparticles for Signal Enhancement of Antibody Microarrays on Nanoporous Silicon.

    Järås, K., Tajudin, A., Ressine, A., Soukka, T., György Marko-Varga, Anders Bjartell, Johan Malm, Thomas Laurell & Hans Lilja, 2008, In : Journal of Proteome Research. 7, p. 1308-1314

    Research output: Contribution to journalArticle

  41. Mass Spectrometry Analysis of a Protein Kinase CK2 beta Subunit Interactome Isolated from Mouse Brain by Affinity Chromatography.

    Arrigoni, G., Pagano, M., Sarno, S., Cesaro, L., Peter James & Pinna, L., 2008, In : Journal of Proteome Research. 7, 3, p. 990-1000

    Research output: Contribution to journalArticle

  42. Metabolomic and proteomic analysis of a clonal insulin-producing beta-cell line (INS-1 832/13).

    Celine Fernandez, Krus, U., Hallgard, E., Peter Spégel, Cecilia Holm, Krogh, M., Wårell, K., Peter James & Hindrik Mulder, 2008, In : Journal of Proteome Research. 7, 1, p. 400-411

    Research output: Contribution to journalArticle

  43. 2009
  44. Expression of a Core 3 Disialyl-Le(x) Hexasaccharide in Human Colorectal Cancers: A Potential Marker of Malignant Transformation in Colon.

    Robbe-Masselot, C., Herrmann, A., Maes, E., Ingemar Carlstedt, Michalski, J-C. & Capon, C., 2009, In : Journal of Proteome Research.

    Research output: Contribution to journalArticle

  45. Omics Analyses Reveal a Potential Link between Hormone-Sensitive Lipase and Polyamine Metabolism.

    Fernandez, C., Krogh, M., Wårell, K., Alm, K., Stina Oredsson, Lo Persson, Peter James & Cecilia Holm, 2009, In : Journal of Proteome Research. 8, p. 5008-5019

    Research output: Contribution to journalArticle

  46. Quantification of Membrane Proteins Using Nonspecific Protease Digestions

    Bendz, M., Carlsson Möller, M., Arrigoni, G., Wåhlander, Å., Stella, R., Cappadona, S., Fredrik Levander, Lars Hederstedt & Peter James, 2009, In : Journal of Proteome Research. 8, 12, p. 5666-5673

    Research output: Contribution to journalArticle

  47. The Proteios Software Environment: an extensible multiuser platform for management and analysis of proteomics data

    Jari Häkkinen, Vincic, G., Månsson, O., Wårell, K. & Fredrik Levander, 2009, In : Journal of Proteome Research. 8, 6, p. 3037-3043

    Research output: Contribution to journalArticle

  48. 2010
  49. Aptamer microarray mediated capture and mass spectrometry identification of biomarker in serum samples.

    Ji-Young, A., Lee, S. W., Kang, H. S., Jo, M., Lee, D-K., Thomas Laurell & Kim, S., 2010, In : Journal of Proteome Research. 9, 11, p. 5568-5573

    Research output: Contribution to journalArticle

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