Journal of Proteome Research, 1535-3893

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  2. Mining the Proteome Associated with Rheumatic and Autoimmune Diseases

    Ruiz-Romero, C., Lam, M. P. Y., Nilsson, P., Patrik Önnerfjord, Utz, P. J., Van Eyk, J. E., Venkatraman, V., Fert-Bober, J., Watt, F. E. & Blanco, F. J., 2019 Oct 10, In : Journal of Proteome Research.

    Research output: Contribution to journalArticle

  3. Biology/Disease-Driven Initiative on Protein-Aggregation Diseases of the Human Proteome Project: Goals and Progress to Date

    Boersema, P. J., Melnik, A., Hazenberg, B. P. C., Melinda Rezeli, György Marko-Varga, Kamiie, J., Portelius, E., Blennow, K., Zubarev, R. A., Polymenidou, M. & Picotti, P., 2018 Dec 7, In : Journal of Proteome Research. 17, 12, p. 4072-4084

    Research output: Contribution to journalArticle

  4. Quantitation of 87 Proteins by nLC-MRM/MS in Human Plasma: Workflow for Large-Scale Analysis of Biobank Samples

    Melinda Rezeli, Sjödin, K., Henrik Lindberg, Olof Gidlöf, Lindahl, B., Jernberg, T., Spaak, J., David Erlinge & György Marko-Varga, 2017 Sep 1, In : Journal of Proteome Research. 16, 9, p. 3242-3254 13 p.

    Research output: Contribution to journalArticle

  5. Blood Metabolic Signatures of Body Mass Index: A Targeted Metabolomics Study in the EPIC Cohort

    Carayol, M., Leitzmann, M. F., Ferrari, P., Zamora-Ros, R., Achaintre, D., Stepien, M., Schmidt, J. A., Travis, R. C., Overvad, K., Tjønneland, A., Hansen, L., Kaaks, R., Kühn, T., Boeing, H., Bachlechner, U., Trichopoulou, A., Bamia, C., Palli, D., Agnoli, C., Tumino, R. & 18 others, Vineis, P., Panico, S., Quirós, J. R., Sánchez-Cantalejo, E., Huerta, J. M., Ardanaz, E., Arriola, L., Agudo, A., Nilsson, J., Olle Melander, Bueno de Mesquita, B., Peeters, P. H., Wareham, N., Khaw, K-T., Jenab, M., Key, T. J., Scalbert, A. & Rinaldi, S., 2017 Sep 1, In : Journal of Proteome Research. 16, 9, p. 3137-3146 10 p.

    Research output: Contribution to journalArticle

  6. Improvements in Mass Spectrometry Assay Library Generation for Targeted Proteomics

    Teleman, J., Hauri, S. & Johan Malmström, 2017 Jul 7, In : Journal of Proteome Research. 16, 7, p. 2384-2392 9 p.

    Research output: Contribution to journalArticle

  7. Identification of a Novel Autoimmune Peptide Epitope of Prostein in Prostate Cancer

    Pin, E., Henjes, F., Hong, M. G., Wiklund, F., Magnusson, P., Anders Bjartell, Uhlén, M., Nilsson, P. & Schwenk, J. M., 2017 Jan 6, In : Journal of Proteome Research. 16, 1, p. 204-216 13 p.

    Research output: Contribution to journalArticle

  8. FK506, an Immunosuppressive Drug, Induces Autophagy by Binding to the V-ATPase Catalytic Subunit A in Neuronal Cells

    Kim, D., Hwang, H. Y., Kim, Y. J., Lee, J. Y., Yoo, J. S., György Marko-Varga & Kwon, H. J., 2017 Jan 6, In : Journal of Proteome Research. 16, 1, p. 55-64 10 p.

    Research output: Contribution to journalArticle

  9. Dinosaur: A Refined Open-Source Peptide MS Feature Detector

    Teleman, J., Chawade, A., Sandin, M., Fredrik Levander & Johan Malmström, 2016 Jul 1, In : Journal of Proteome Research. 15, 7, p. 2143-2151 9 p.

    Research output: Contribution to journalArticle

  10. Targeted MS Assay Predicting Tamoxifen Resistance in Estrogen-Receptor-Positive Breast Cancer Tissues and Sera

    Tommaso De Marchi, Kuhn, E., Dekker, L. J. M., Stingl, C., Braakman, R. B. H., Opdam, M., Linn, S. C., Sweep, F. C. G. J., Span, P. N., Luider, T. M., Foekens, J. A., Martens, J. W. M., Carr, S. A. & Umar, A., 2016 Apr 1, In : Journal of Proteome Research. 15, 4, p. 1230-42 13 p.

    Research output: Contribution to journalArticle

  11. Elucidating the Molecular Composition of Cartilage by Proteomics

    Hsueh, M. F., Khabut, A., Sven Kjellström, Patrik Önnerfjord & Kraus, V. B., 2016 Feb 5, In : Journal of Proteome Research. 15, 2, p. 374-388 15 p.

    Research output: Contribution to journalArticle

  12. Targeted Proteomics Approach for Precision Plant Breeding

    Chawade, A., Alexandersson, E., Bengtsson, T., Andreasson, E. & Fredrik Levander, 2016 Feb 5, In : Journal of Proteome Research. 15, 2, p. 638-642 9 p.

    Research output: Contribution to journalArticle

  13. Integrated Transcriptomic and Glycomic Profiling of Glioma Stem Cell Xenografts

    Wildburger, N. C., Zhou, S., Zacharias, L. G., Kroes, R. A., Moskal, J. R., Schmidt, M., Mirzaei, P., Gumin, J., Lang, F., Mechref, Y. & Carol Nilsson, 2015 Sep 4, In : Journal of Proteome Research. 14, 9, p. 3932-9 8 p.

    Research output: Contribution to journalArticle

  14. ESI-MS/MS and MALDI-IMS Localization Reveal Alterations in Phosphatidic Acid, Diacylglycerol, and DHA in Glioma Stem Cell Xenografts

    Wildburger, N. C., Wood, P. L., Gumin, J., Lichti, C. F., Emmett, M. R., Lang, F. & Carol L Nilsson, 2015 Jun 5, In : Journal of Proteome Research. 14, 6, p. 2511-9 9 p.

    Research output: Contribution to journalArticle

  15. Data Processing Has Major Impact on the Outcome of Quantitative Label-Free LC-MS Analysis

    Chawade, A., Sandin, M., Teleman, J., Johan Malmström & Fredrik Levander, 2015, In : Journal of Proteome Research. 14, 2, p. 676-687

    Research output: Contribution to journalArticle

  16. Integration of Proteomics and Transcriptomics Data Sets for the Analysis of a Lymphoma B-Cell Line in the Context of the Chromosome-Centric Human Proteome Project

    Diez, P., Droste, C., Degano, R. M., Gonzalez-Munoz, M., Ibarrola, N., Perez-Andres, M., Garin-Muga, A., Segura, V., György Marko-Varga, LaBaer, J., Orfao, A., Corrales, F. J., De Las Rivas, J. & Fuentes, M., 2015, In : Journal of Proteome Research. 14, 9, p. 3530-3540

    Research output: Contribution to journalArticle

  17. Targeted Proteomic Analyses of Nasal Lavage Fluid in Persulfate-Challenged Hairdressers with Bleaching Powder-Associated Rhinitis

    Mörtstedt, H., Neserin Ali, Monica Kåredal, Jacobsson, H., Emelie Rietz, Diab, K., Jörn Nielsen, Jönsson, B. A. & Christian Lindh, 2015, In : Journal of Proteome Research. 14, 2, p. 860-873

    Research output: Contribution to journalArticle

  18. Quest for Missing Proteins: Update 2015 on Chromosome-Centric Human Proteome Project

    Horvatovich, P., Lundberg, E., Chen, Y-J., Sung, T-Y., He, F., Nice, E., Goode, R., Yu, S., Ranganathan, S., Baker, M., Domont, R., Valesquez, E., Li, D., Liu, S., Wang, Q., He, Q-Y., Menon, R., Guan, Y., Corrales, F., Segura, V. & 33 others, Casal, I., Pascual-Montano, A., Albar, J. P., Fuentes, M., Gonzalez-Gonzalez, M., Diez, P., Ibarolla, N., Degano, R., Mohammed, Y., Borchers, C., Urbani, A., Soggiu, A., Yamamoto, T., Archakov, A., Ponomarenko, E., Lisitsa, A., Lichti, C., Mostovenko, E., Kroes, R., Melinda Rezeli, Végvári, Á., Fehniger, T., Bischoff, R., Vizcaíno, J. A., Deutsch, E., Lane, L., Nilsson, C., György Marko-Varga, Omenn, G., Jeong, S-K., Cho, J-Y., Paik, Y-K. & Hancock, W., 2015, In : Journal of Proteome Research. 14, 9, p. 3415-3431

    Research output: Contribution to journalArticle

  19. An Integrated Workflow for Multiplex CSF Proteomics and Peptidomics-Identification of Candidate Cerebrospinal Fluid Biomarkers of Alzheimer's Disease

    Holtta, M., Lennart Minthon, Oskar Hansson, Holmen-Larsson, J., Pike, I., Ward, M., Kuhn, K., Ruetschi, U., Zetterberg, H., Blennow, K. & Gobom, J., 2015, In : Journal of Proteome Research. 14, 2, p. 654-663

    Research output: Contribution to journalArticle

  20. Use of ENCODE Resources to Characterize Novel Proteoforms and Missing Proteins in the Human Proteome

    Nilsson, C., Mostovenko, E., Lichti, C., Ruggles, K., Fenyö, D., Rosenbloom, K., Hancock, W., Paik, Y-K., Omenn, G., LaBaer, J., Kroes, R., Uhlén, M., Hober, S., Végvári, Á., Andrén, P., Sulman, E., Lang, F., Fuentes, M., Carlsohn, E., Emmett, M. & 4 others, Moskal, J., Berven, F., Fehniger, T. & György Marko-Varga, 2015, In : Journal of Proteome Research. 14, 2, p. 603-608

    Research output: Contribution to journalArticle

  21. A Combined Shotgun and Targeted Mass Spectrometry Strategy for Breast Cancer Biomarker Discovery

    Martin Sjöström, Ossola, R., Breslin, T., Rinner, O., Malmstroem, L., Schmidt, A., Aebersold, R., Johan Malmström & Emma Niméus, 2015, In : Journal of Proteome Research. 14, 7, p. 2807-2818

    Research output: Contribution to journalArticle

  22. Molecular Portrait of Breast-Cancer-Derived Cell Lines Reveals Poor Similarity with Tumors.

    Cifani, P., Kirik, U., Waldemarson, S. & Peter James, 2015, In : Journal of Proteome Research. 14, 7, p. 2819-2827

    Research output: Contribution to journalArticle

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