Clinical Protein Science and Imaging

Organisational unit: Research group

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  1. 2020
  2. Use of proteomics to identify biomarkers associated with chronic kidney disease and long-term outcomes in patients with myocardial infarction

    Edfors, R., Lindhagen, L., Spaak, J., Evans, M., P. Andell, Baron, T., Mörtberg, J., M. Rezeli, Salzinger, B., Lundman, P., Szummer, K., Tornvall, P., Wallén, H. N., Jacobson, S. H., Kahan, T., G. Marko-Varga, D. Erlinge, James, S., Lindahl, B. & Jernberg, T., 2020 Jul 8, In : Journal of Internal Medicine.

    Research output: Contribution to journalArticle

  3. Identification and validation of VEGFR2 kinase as a target of voacangine by a systematic combination of DARTS and MSI

    Yonghyo Kim, Yutaka Sugihara, Kim, T. Y., Cho, S. M., Kim, J. Y., Lee, J. Y., Yoo, J. S., Song, D., Han, G., Melinda Rezeli, Charlotte Welinder, Roger Appelqvist, György Marko-Varga & Kwon, H. J., 2020 Mar 27, In : Biomolecules. 10, 4, 508.

    Research output: Contribution to journalArticle

  4. Protein Expression in Metastatic Melanoma and the Link to Disease Presentation in a Range of Tumor Phenotypes

    Yonghyo Kim, Jeovanis Gil, Pla, I., Aniel Sanchez, Lazaro Hiram Betancourt, Boram Lee, Roger Appelqvist, Christian Ingvar, Lundgren, L., Håkan Olsson, Bo Baldetorp, Kwon, H. J., Henriett Oskolás, Melinda Rezeli, Doma, V., Kárpáti, S., Szasz, A. M., Németh, I. B., Johan Malm & György Marko-Varga, 2020 Mar 24, In : Cancers. 12, 3, 767.

    Research output: Contribution to journalReview article

  5. YAP1 is an independent prognostic marker in pancreatic cancer and associated with extracellular matrix remodeling

    Qimin Zhou, Bauden, M., Roland Andersson, Dingyuan Hu, György Marko-Varga, Xu, J., Sasor, A., Dai, H., Krzysztof Pawłowski, Said Hilmersson, K., Chen, X. & Daniel Ansari, 2020 Feb 13, In : Journal of Translational Medicine. 18, p. 1-10 77.

    Research output: Contribution to journalArticle

  6. Human iPSC-Derived Hippocampal Spheroids: An Innovative Tool for Stratifying Alzheimer Disease Patient-Specific Cellular Phenotypes and Developing Therapies

    Pomeshchik, Y., Klementieva, O., Gil, J., Martinsson, I., Hansen, M. G., de Vries, T., Sancho-Balsells, A., Russ, K., Savchenko, E., Collin, A., Vaz, A. R., Bagnoli, S., Nacmias, B., Rampon, C., Sorbi, S., Brites, D., Marko-Varga, G., Kokaia, Z., Rezeli, M., Gouras, G. K. & 1 others, Laurent Roybon, 2020, In : Stem Cell Reports. 15, 1, p. 256-273 18 p.

    Research output: Contribution to journalArticle

  7. Mass Spectrometry-Based Protein Biomarker Discovery in Pancreatic Cancer

    Qimin Zhou, 2020, Lund: Lund University, Faculty of Medicine. 84 p.

    Research output: ThesisDoctoral Thesis (compilation)

  8. 2019
  9. Targeting the hydrophilic regions of recombinant proteins by MS via in-solution buffer-free trypsin digestion

    Lázaro H. Betancourt, Espinosa, L. A., Ramos, Y., Bequet-Romero, M., Rodríguez, E. N., Aniel Sánchez, Gyorgy Marko-Varga, González, L. J. & Besada, V., 2019 Dec 10, In : European Journal of Mass Spectrometry.

    Research output: Contribution to journalLetter

  10. Current status of clinical proteogenomics in lung cancer

    Nishimura, T., Nakamura, H., Végvári, Á., György Marko-Varga, Furuya, N. & Saji, H., 2019 Aug, In : Expert Review of Proteomics. 16, 9, p. 761-772 12 p.

    Research output: Contribution to journalReview article

  11. The hippo signaling pathway in pancreatic cancer

    Daniel Ansari, Ohlsson, H., Althini, C., Bauden, M., Qimin Zhou, Dingyuan Hu & Roland Andersson, 2019 Jul, In : Anticancer research. 39, 7, p. 3317-3321 5 p.

    Research output: Contribution to journalReview article

  12. The role of PEDF in pancreatic cancer

    Daniel Ansari, Althini, C., Ohlsson, H., Bauden, M. & Roland Andersson, 2019 Jul, In : Anticancer research. 39, 7, p. 3311-3315 5 p.

    Research output: Contribution to journalReview article

  13. Alpha-1-acid glycoprotein 1 is upregulated in pancreatic ductal adenocarcinoma and confers a poor prognosis

    Q. Zhou, Roland Andersson, Dingyuan Hu, Bauden, M., Sasor, A., Bygott, T., Krzysztof PawŁowski, Pla, I., György Marko-Varga & Daniel Ansari, 2019 Jun 29, In : Translational Research. 212, p. 67-79 13 p.

    Research output: Contribution to journalArticle

  14. A novel conserved family of Macro-like domains—putative new players in ADP-ribosylation signaling

    Dudkiewicz, M. & Krzysztof Pawlowski, 2019 May 1, In : PeerJ. 2019, 5, e6863.

    Research output: Contribution to journalArticle

  15. Optimization of sample preparation for transporter protein quantification in tissues by LC–MS/MS

    Jankovskaja, S., Kamiie, J., Melinda Rezeli, Gustavsson, L., Yutaka Sugihara, Tasso Miliotis, Ruzgas, T. & György Marko-Varga, 2019 Feb 5, In : Journal of Pharmaceutical and Biomedical Analysis. 164, p. 9-15 7 p.

    Research output: Contribution to journalArticle

  16. A collaborative analysis of individual participant data from 19 prospective studies assesses circulating Vitamin D and prostate cancer risk

    Travis, R. C., Perez-Cornago, A., Jonas Manjer, Johan Malm, Martin Almquist, Allen, N. E. & et al., 2019, In : Cancer Research. 79, 1, p. 274-285 12 p.

    Research output: Contribution to journalArticle

  17. Clinical protein science in translational medicine targeting malignant melanoma

    Gil, J., Betancourt, L. H., Pla, I., Sanchez, A., Appelqvist, R., Miliotis, T., Kuras, M., Oskolas, H., Kim, Y., Horvath, Z., Eriksson, J., Berge, E., Burestedt, E., Jönsson, G., Baldetorp, B., Ingvar, C., Olsson, H., Lundgren, L., Horvatovich, P., Murillo, J. R. & 18 others, Yutaka Sugihara, Charlotte Welinder, Elisabet Wieslander, Boram Lee, Henrik Lindberg, Krzysztof Pawłowski, Kwon, H. J., Doma, V., Timar, J., Karpati, S., A. Marcell Szasz, Németh, I. B., Nishimura, T., Corthals, G., Melinda Rezeli, Knudsen, B., Johan Malm & György Marko-Varga, 2019, In : Cell Biology and Toxicology. 35, 4, p. 293-332

    Research output: Contribution to journalArticle

  18. Progressive changes in human follicular fluid composition over the course of ovulation: quantitative proteomic analyses

    Poulsen, L. L. C., Pla, I., A. Sanchez, Grøndahl, M. L., György Marko-Varga, Yding Andersen, C., Englund, A. L. M. & J. Malm, 2019, In : Molecular and Cellular Endocrinology. 495, Sept., 110522.

    Research output: Contribution to journalArticle

  19. Proteomic signatures of brain regions affected by tau pathology in early and late stages of Alzheimer's disease

    Mendonça, C. F., Magdalena Kuras, Nogueira, F. C. S., Plá, I., Hortobágyi, T., Csiba, L., Palkovits, M., Renner, É., Döme, P., György Marko-Varga, Domont, G. B. & Melinda Rezeli, 2019, In : Neurobiology of Disease. 130, 104509.

    Research output: Contribution to journalArticle

  20. Quantitative proteomics identifies brain acid soluble protein 1 (BASP1) as a prognostic biomarker candidate in pancreatic cancer tissue

    Qimin Zhou, Roland Andersson, Dingyuan Hu, Bauden, M., Kristl, T., Sasor, A., Krzysztof Pawłowski, Pla, I., Hilmersson, K. S., Zhou, M., Lu, F., György Marko-Varga & Daniel Ansari, 2019, In : EBioMedicine. 43, p. 282-294 13 p.

    Research output: Contribution to journalArticle

  21. Sodium dodecyl sulfate free gel electrophoresis/electroelution sorting for peptide fractionation

    Ramos, Y., González, A., Sosa-Acosta, P., Perez-Riverol, Y., García, Y., Castellanos-Serra, L., Jeovanis Gil, Aniel Sánchez, González, L. J. & Besada, V., 2019, In : Journal of Separation Science. 42, 24, p. 3712-3717

    Research output: Contribution to journalArticle

  22. Ultrasensitive Immunoprofiling of Plasma Extracellular Vesicles Identifies Syndecan-1 as a Potential Tool for Minimally Invasive Diagnosis of Glioma

    Indira Chandran, V., Charlotte Welinder, Månsson, A-S., Offer, S., Freyhult, E., Pernemalm, M., Lund, S. M., Pedersen, S., Lehtiö, J., Gyorgy Marko-Varga, Maria C Johansson, Elisabet Englund, Pia C Sundgren & Mattias Belting, 2019, In : Clinical Cancer Research. 25, 10, p. 3115-3127

    Research output: Contribution to journalArticle

  23. 2018
  24. Biology/Disease-Driven Initiative on Protein-Aggregation Diseases of the Human Proteome Project: Goals and Progress to Date

    Boersema, P. J., Melnik, A., Hazenberg, B. P. C., Melinda Rezeli, György Marko-Varga, Kamiie, J., Portelius, E., Blennow, K., Zubarev, R. A., Polymenidou, M. & Picotti, P., 2018 Dec 7, In : Journal of Proteome Research. 17, 12, p. 4072-4084

    Research output: Contribution to journalArticle

  25. Mass spectrometry evaluation of a neuroblastoma SH-SY5Y cell culture protocol

    Murillo, J. R., Pla, I., Goto-Silva, L., Nogueira, F. C. S., Domont, G. B., Perez-Riverol, Y., Aniel Sánchez & Junqueira, M., 2018 Oct 15, In : Analytical Biochemistry. 559, p. 51-54 4 p.

    Research output: Contribution to journalArticle

  26. Primary lymph node ratio and hepatic resection for colorectal metastases

    Daniel Ansari, William Torén & Roland Andersson, 2018 Apr, In : Hepatobiliary surgery and nutrition. 7, 2, p. 149-150 2 p.

    Research output: Contribution to journalDebate/Note/Editorial

  27. Large Scale Identification of Variant Proteins in Glioma Stem Cells

    Mostovenko, E., Végvári, Á., Melinda Rezeli, Lichti, C. F., Fenyö, D., Wang, Q., Lang, F. F., Sulman, E. P., Sahlin, K. B., György Marko-Varga & Carol L. Nilsson, 2018 Jan 17, In : ACS Chemical Neuroscience. 9, 1, p. 73-79 7 p.

    Research output: Contribution to journalArticle

  28. Global pentapeptide statistics are far away from expected distributions

    Poznański, J., Topiński, J., Muszewska, A., Dębski, K. J., Hoffman-Sommer, M., Krzysztof Pawłowski & Grynberg, M., 2018, In : Scientific Reports. 8, 1, 15178.

    Research output: Contribution to journalArticle

  29. Long-term prediction of prostate cancer diagnosis and death using PSA and obesity related anthropometrics at early middle age: Data from the malmö preventive project

    Assel, M. J., Axel Gerdtsson, Thorek, D. L. J., Carlsson, S. V., Johan Malm, Scardino, P. T., Vickers, A., Lilja, H. & David Ulmert, 2018, In : Oncotarget. 9, 5, p. 5778-5785 8 p.

    Research output: Contribution to journalArticle

  30. Proteomic analyses identify prognostic biomarkers for pancreatic ductal adenocarcinoma

    Dingyuan Hu, Daniel Ansari, Krzysztof Pawlowski, Qimin Zhou, Sasor, A., Charlotte Welinder, Kristl, T., Bauden, M., Melinda Rezeli, Jiang, Y., György Marko-Varga & Roland Andersson, 2018, In : Oncotarget. 9, 11, p. 9789-9807 19 p.

    Research output: Contribution to journalArticle

  31. 2017
  32. Histone profiling reveals the H1.3 histone variant as a prognostic biomarker for pancreatic ductal adenocarcinoma

    Bauden, M., Kristl, T., Sasor, A., Bodil Andersson, György Marko-Varga, Roland Andersson & Daniel Ansari, 2017 Dec 2, In : BMC Cancer. 17, 1, 810.

    Research output: Contribution to journalArticle

  33. Quantitation of 87 Proteins by nLC-MRM/MS in Human Plasma: Workflow for Large-Scale Analysis of Biobank Samples

    Melinda Rezeli, Sjödin, K., Henrik Lindberg, Olof Gidlöf, Lindahl, B., Jernberg, T., Spaak, J., David Erlinge & György Marko-Varga, 2017 Sep 1, In : Journal of Proteome Research. 16, 9, p. 3242-3254 13 p.

    Research output: Contribution to journalArticle

  34. Quantitative proteomic analysis identifies proteins and pathways related to neuronal development in differentiated SH-SY5Y neuroblastoma cells

    Murillo, J. R., Goto-Silva, L., Aniel Sánchez, Nogueira, F. C. S., Domont, G. B. & Junqueira, M., 2017 Sep 1, In : EuPA Open Proteomics. 16, p. 1-11 11 p.

    Research output: Contribution to journalArticle

  35. Pathophysiology of meningioma growth in pregnancy

    Hortobágyi, T., Bencze, J., Murnyák, B., Kouhsari, M. C., Bognár, L. & György Marko-Varga, 2017 Jan 1, In : Open Medicine (Poland). 12, 1, p. 195-200 6 p.

    Research output: Contribution to journalReview article

  36. 2015
  37. Association of Chromosome 19 to Lung Cancer Genotypes and Phenotypes

    Wang, X., Zhang, Y., Carol Nilsson, Berven, F., Andrén, P. E., Carlsohn, E., Horvatovich, P., Johan Malm, Fuentes, M., Végvári, Á., Charlotte Welinder, Fehniger, T., Melinda Rezeli, Edula, G., Nishimura, T. & György Marko-Varga, 2015, In : Cancer Metastasis Review. 34, 2, p. 217-226

    Research output: Contribution to journalReview article

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