Department of Immunotechnology

Organisational unit: Department

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  1. 2020
  2. Interactive proteogenomic exploration of response to Fusarium head blight in oat varieties with different resistance

    J Willforss, S Leonova, Tillander, J., Andreasson, E., Marttila, S., Olsson, O., Chawade, A. & F Levander, 2020 Apr 30, In : Journal of Proteomics. 218, p. 103688

    Research output: Contribution to journalArticle

  3. A bispecific IgG format containing four independent antigen binding sites

    Anne Ljungars, Schiött, T., Mattson, U., Steppa, J., Hambe, B., Semmrich, M., Mats Ohlin, Tornberg, U. C. & Mattsson, M., 2020 Jan 31, In : Scientific Reports. 10, 1, 1546.

    Research output: Contribution to journalArticle

  4. Benchmarking immunoinformatic tools for the analysis of antibody repertoire sequences

    Smakaj, E., Babrak, L., Mats Ohlin, Shugay, M., Briney, B., Tosoni, D., Galli, C., Grobelsek, V., D'Angelo, I., Olson, B., Reddy, S., Greiff, V., Trück, J., Marquez, S., Lees, W. & Miho, E., 2020, In : Bioinformatics (Oxford, England). 36, 6, p. 1731-1739 9 p.

    Research output: Contribution to journalArticle

  5. OGRDB: a reference database of inferred immune receptor genes

    Lees, W., Busse, C. E., Corcoran, M., Mats Ohlin, Scheepers, C., Matsen, F. A., Yaari, G., Watson, C. T., Collins, A., Shepherd, A. J. & AIRR Community, 2020, In : Nucleic Acids Research. 48, D1, p. D964-D970

    Research output: Contribution to journalArticle

  6. The Role of Matrix Metalloproteinases (MMP-2 and MMP-9) in Ageing and Longevity: Focus on Sicilian Long-Living Individuals (LLIs)

    Cancemi, P., Aiello, A., Accardi, G., Caldarella, R., Candore, G., Caruso, C., Ciaccio, M., Cristaldi, L., Di Gaudio, F., Valentina Siino & Vasto, S., 2020, In : Mediators of Inflammation. 2020, 8635158.

    Research output: Contribution to journalArticle

  7. 2019
  8. Digital twins to personalize medicine

    Björnsson, B., Carl Borrebaeck, Elander, N., Gasslander, T., Gawel, D. R., Gustafsson, M., Jörnsten, R., Lee, E. J., Li, X., Lilja, S., Martínez-Enguita, D., Matussek, A., Sandström, P., Schäfer, S., Stenmarker, M., Sun, X. F., Sysoev, O., Zhang, H. & Benson, M., 2019 Dec 31, In : Genome Medicine. 12, 4.

    Research output: Contribution to journalReview article

  9. Phenotypic antibody discovery and mining of complex antibody libraries

    Anne Ljungars, 2019 Dec 19, Lund: Department of Immunotechnology, Lund University. 205 p.

    Research output: ThesisDoctoral Thesis (compilation)

  10. Intralesional EBV-DNA load as marker of prognosis for nasopharyngeal cancer

    Johan S. Nilsson, Ola Forslund, Andersson, F. C., Malin Lindstedt & Greiff, L., 2019 Oct, In : Scientific Reports. 9, 15432.

    Research output: Contribution to journalArticle

  11. Proteomics of PTI and Two ETI Immune Reactions in Potato Leaves

    Resjö, S., Zahid, M. A., Burra, D. D., Lenman, M., Fredrik Levander & Andreasson, E., 2019 Sep 24, In : International Journal of Molecular Sciences. 20, 19

    Research output: Contribution to journalArticle

  12. Deep mining of complex antibody phage pools generated by cell panning enables discovery of rare antibodies binding new targets and epitopes

    Anne Ljungars, Svensson, C., Carlsson, A., Birgersson, E., Tornberg, U. C., Frendéus, B., Mats Ohlin & Mattsson, M., 2019 Jul 30, In : Frontiers in Pharmacology. 10, JULY, 847.

    Research output: Contribution to journalArticle

  13. Towards a standardized bioinformatics infrastructure for N- and O-glycomics

    Rojas-Macias, M. A., Mariethoz, J., Andersson, P., Jin, C., Venkatakrishnan, V., Aoki, N. P., Shinmachi, D., Ashwood, C., Madunic, K., Zhang, T., Miller, R. L., Horlacher, O., Struwe, W. B., Watanabe, Y., Okuda, S., Levander, F., Kolarich, D., Rudd, P. M., Wuhrer, M., Kettner, C. & 4 others, Packer, N. H., Aoki-Kinoshita, K. F., Lisacek, F. & Karlsson, N. G., 2019 Jul 22, In : Nature Communications. 10, 1, 3275.

    Research output: Contribution to journalReview article

  14. Mechanistic Toxicology: Molecular interactions and underlying mechanisms of dendritic cell activation in skin sensitization

    Lindberg, T., 2019 May 21, Department of Immunotechnology, Lund University. 165 p.

    Research output: ThesisDoctoral Thesis (compilation)

  15. Batch adjustment by reference alignment (BARA): Improved prediction performance in biological test sets with batch effects

    Gradin, R., Malin Lindstedt & Johansson, H., 2019 Feb 22, In : PLoS ONE. 14, 2, e0212669.

    Research output: Contribution to journalArticle

  16. Skin Sensitization Testing-What's Next?

    Grundström, G. & Carl A.K. Borrebaeck, 2019 Feb 4, In : International Journal of Molecular Sciences. 20, 3

    Research output: Contribution to journalArticle

  17. The interactome of palmitoyl-protein thioesterase 1 (PPT1) affects neuronal morphology and function

    Sapir, T., Segal, M., Grigoryan, G., Hansson, K. M., Peter James, Segal, M. & Reiner, O., 2019 Jan 29, In : Frontiers in Cellular Neuroscience. 13, 92.

    Research output: Contribution to journalArticle

  18. A Human IgE Antibody Binding Site on Der p 2 for the Design of a Recombinant Allergen for Immunotherapy

    Glesner, J., Kapingidza, A. B., Godzwon, M., Offermann, L. R., Mueller, G. A., DeRose, E. F., Wright, P., Richardson, C. M., Woodfolk, J. A., Vailes, L. D., Wünschmann, S., London, R. E., Chapman, M. D., Mats Ohlin, Chruszcz, M. & Pomés, A., 2019, In : Journal of immunology (Baltimore, Md. : 1950). 203, 9, p. 2545-2556 12 p.

    Research output: Contribution to journalArticle

  19. Dendritic cell subpopulations in nasopharyngeal cancer

    Johan S. Nilsson, Milad Abolhalaj, Kristina Lundberg, Malin Lindstedt & Greiff, L., 2019, In : Oncology Letters. 17, 2, p. 2557-2561 5 p.

    Research output: Contribution to journalArticle

  20. Diagnostic spectrum and time intervals in Sweden's first diagnostic center for patients with nonspecific symptoms of cancer

    Stenman, E., Palmér, K., Rydén, S., Sävblom, C., Svensson, I., Rose, C., Jianguang Ji, Mef Nilbert & Jan Sundquist, 2019, In : Acta oncologica (Stockholm, Sweden). 58, 3, p. 296-305

    Research output: Contribution to journalArticle

  21. Evaluation of in vitro testing strategies for hazard assessment of the skin sensitization potential of “real-life” mixtures: The case of henna-based hair-colouring products containing p-phenylenediamine

    de Ávila, R. I., Veloso, D. F. M. C., Teixeira, G. C., Rodrigues, T. L., Lindberg, T., Malin Lindstedt, Fonseca, S. G., Lima, E. M. & Valadares, M. C., 2019, In : Contact Dermatitis. 81, 3, p. 194-209

    Research output: Contribution to journalArticle

  22. Inferred Allelic Variants of Immunoglobulin Receptor Genes: A System for Their Evaluation, Documentation, and Naming

    Ohlin, M., Scheepers, C., Corcoran, M., Lees, W. D., Busse, C. E., Bagnara, D., Thörnqvist, L., Bürckert, J. P., Jackson, K. J. L., Ralph, D., Schramm, C. A., Marthandan, N., Breden, F., Scott, J., Matsen Iv, F. A., Greiff, V., Yaari, G., Kleinstein, S. H., Christley, S., Sherkow, J. S. & 5 others, Kossida, S., Lefranc, M. P., van Zelm, M. C., Watson, C. T. & Collins, A. M., 2019, In : Frontiers in Immunology. 10

    Research output: Contribution to journalReview article

  23. Integrated epigenomic and transcriptomic analysis reveals TP63 as a novel player in clinically aggressive chronic lymphocytic leukemia

    Papakonstantinou, N., Ntoufa, S., Tsagiopoulou, M., Moysiadis, T., Bhoi, S., Malousi, A., Psomopoulos, F., Mansouri, L., Laidou, S., Papazoglou, D., Gounari, M., Pasentsis, K., Plevova, K., Kuci-Emruli, V., Duran-Ferrer, M., Davis, Z., Ek, S., Rossi, D., Gaidano, G., Ritgen, M. & 11 others, Oscier, D., Stavroyianni, N., Pospisilova, S., Davi, F., Ghia, P., Hadzidimitriou, A., Belessi, C., Martin-Subero, J. I., Pott, C., Rosenquist, R. & Stamatopoulos, K., 2019, In : International Journal of Cancer. 144, 11, p. 2695-2706

    Research output: Contribution to journalArticle

  24. In vitro assessment of mechanistic events induced by structurally related chemical rubber sensitizers

    Lindberg, T., Forreryd, A., Ola Bergendorff, Malin Lindstedt & Kathrin S. Zeller, 2019, In : Toxicology in Vitro. 60, p. 144-153 10 p.

    Research output: Contribution to journalArticle

  25. Release of transcriptional repression via ErbB2-induced, SUMO-directed phosphorylation of myeloid zinc finger-1 serine 27 activates lysosome redistribution and invasion

    Brix, D. M., Tvingsholm, S. A., Hansen, M. B., Clemmensen, K. B., Ohman, T., Valentina Siino, Lambrughi, M., Hansen, K., Puustinen, P., Gromova, I., Peter James, Papaleo, E., Varjosalo, M., Moreira, J., Jäättelä, M. & Kallunki, T., 2019, In : Oncogene. 38, 17, p. 3170-3184

    Research output: Contribution to journalArticle

  26. The Human Salivary Antimicrobial Peptide Profile according to the Oral Microbiota in Health, Periodontitis and Smoking

    Grant, M., Kilsgård, O., Åkerman, S., Klinge, B., Demmer, R. T., Johan Malmström & Jönsson, D., 2019, In : Journal of Innate Immunity. 11, 5, p. 432-444

    Research output: Contribution to journalArticle

  27. Univariate and classification analysis reveals potential diagnostic biomarkers for early stage ovarian cancer Type 1 and Type 2

    Marcišauskas, S., Ulfenborg, B., Kristjansdottir, B., Waldemarson, S. & Sundfeldt, K., 2019, In : Journal of Proteomics. 196, p. 57-68 12 p.

    Research output: Contribution to journalArticle

  28. 2018
  29. A platform for phenotypic discovery of therapeutic antibodies and targets applied on Chronic Lymphocytic Leukemia

    A. Ljungars, Mårtensson, L., Jenny Mattsson, Kovacek, M., Sundberg, A., Tornberg, U-C., B. Jansson, Persson, N., V. Kuci Emruli, S. Ek, M. Jerkeman, M. Hansson, G. Juliusson, M. Ohlin, Frendéus, B., Teige, I. & Mattsson, M., 2018 Dec 1, In : JCO Precision Oncology. 2, 1

    Research output: Contribution to journalArticle

  30. Human IgM monoclonal antibodies block HIV-transmission to immune cells in cervico-vaginal tissues and across polarized epithelial cells in vitro

    Devito, C., Ellegård, R., Falkeborn, T., Svensson, L., Mats Ohlin, Larsson, M., Broliden, K. & Hinkula, J., 2018 Dec 1, In : Scientific Reports. 8, 1, 28242.

    Research output: Contribution to journalArticle

  31. Interactions between ABCB1genotype and preoperative statin use impact clinical outcomes among breast cancer patients

    Helga Tryggvadottir, Huzell, L., Gustbée, E., Simonsson, M., Markkula, A., Karin Jirström, Rose, C., Christian Ingvar, Signe Borgquist & Helena Jernström, 2018 Oct 12, In : Frontiers in Oncology. 8, OCT

    Research output: Contribution to journalArticle

  32. Impact of diet-induced obesity on the mouse brain phosphoproteome

    Valentina Siino, Amato, A., Di Salvo, F., Caldara, G. F., Filogamo, M., Peter James & Vasto, S., 2018 Aug 1, In : Journal of Nutritional Biochemistry. 58, p. 102-109 8 p.

    Research output: Contribution to journalArticle

  33. Human bone marrow-derived myeloid dendritic cells show an immature transcriptional and functional profile compared to their peripheral blood counterparts and separate from slan+ non-classical monocytes

    van Leeuwen-Kerkhoff, N., Kristina Lundberg, Westers, T. M., Kordasti, S., Bontkes, H. J., Malin Lindstedt, de Gruijl, T. D. & van de Loosdrecht, A. A., 2018 Jul 16, In : Frontiers in Immunology. 9, JUL, 1619.

    Research output: Contribution to journalArticle

  34. In vitro evolution of antibodies inspired by in vivo evolution

    Persson, H., Kirik, U., Thörnqvist, L., Greiff, L., Fredrik Levander & Mats Ohlin, 2018 Jun 21, In : Frontiers in Immunology. 9, JUN, 1391.

    Research output: Contribution to journalArticle

  35. Bortezomib prevents cytarabine resistance in MCL, which is characterized by down-regulation of dCK and up-regulation of SPIB resulting in high NF-κB activity

    Freiburghaus, C., Venera Kuci Emruli, Johansson, A., Eskelund, C. W., Grønbæk, K., Roger Olsson, Fredrik Ek, Mats Jerkeman & Sara Ek, 2018 Apr 25, In : BMC Cancer. 18, 1, 466.

    Research output: Contribution to journalArticle

  36. Predicting skin sensitizers with confidence — Using conformal prediction to determine applicability domain of GARD

    Forreryd, A., Norinder, U., Lindberg, T. & Malin Lindstedt, 2018 Apr 1, In : Toxicology in Vitro. 48, p. 179-187 9 p.

    Research output: Contribution to journalArticle

  37. The functional 3′-end of immunoglobulin heavy chain variable (IGHV) genes

    Thörnqvist, L. & Mats Ohlin, 2018 Apr 1, In : Molecular Immunology. 96, p. 61-68 8 p.

    Research output: Contribution to journalArticle

  38. Comparative membrane-associated proteomics of three different immune reactions in potato

    Burra, D. D., Lenman, M., Fredrik Levander, Resjö, S. & Andreasson, E., 2018 Feb 10, In : International Journal of Molecular Sciences. 19, 2, 538.

    Research output: Contribution to journalArticle

  39. Advancing the immunoaffinity platform AFFIRM to targeted measurements of proteins in serum in the pg/ml range

    Säll, A., Corbee, D., Vikström, S., Filip Ottosson, Persson, H. & Waldemarson, S., 2018 Feb 1, In : PLoS ONE. 13, 2, e0189116.

    Research output: Contribution to journalArticle

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