Carl Troein

Researcher
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  1. 2019
  2. Homology and linkage in crossover for linear genomes of variable length

    Adriaan Merlevede, Åhl, H. & Carl Troein, 2019, In : PLoS ONE. 14, 1, e0209712.

    Research output: Contribution to journalArticle

  3. 2018
  4. Fenton reaction facilitates organic nitrogen acquisition by an ectomycorrhizal fungus

    Michiel Op De Beeck, Carl Troein, Peterson, C., Per Persson & Anders Tunlid, 2018, In : New Phytologist. 218, 1, p. 335-343

    Research output: Contribution to journalArticle

  5. 2016
  6. Selection Shapes Transcriptional Logic and Regulatory Specialization in Genetic Networks.

    Fogelmark, K., Peterson, C. & Carl Troein, 2016, In : PLoS ONE. 11, 2, e0150340.

    Research output: Contribution to journalArticle

  7. 2014
  8. Light and circadian regulation of clock components aids flexible responses to environmental signals

    Dixon, L. E., Hodge, S. K., van Ooijen, G., Carl Troein, Akman, O. E. & Millar, A. J., 2014, In : New Phytologist. 203, 2, p. 568-577

    Research output: Contribution to journalArticle

  9. Rethinking transcriptional activation in the Arabidopsis circadian clock.

    Fogelmark, K. & Carl Troein, 2014, In : PLoS Computational Biology. 10, 7, e1003705.

    Research output: Contribution to journalArticle

  10. 2013
  11. Carbon availability triggers the decomposition of plant litter and assimilation of nitrogen by an ectomycorrhizal fungus

    Rineau, F., Shah, F., Smits, M. M., Per Persson, Tomas Johansson, Carleer, R., Carl Troein & Anders Tunlid, 2013, In : The Isme Journal. 7, 10, p. 2010-2022

    Research output: Contribution to journalArticle

  12. SBSI: an extensible distributed software infrastructure for parameter estimation in systems biology

    Adams, R., Clark, A., Yamaguchi, A., Hanlon, N., Tsorman, N., Ali, S., Lebedeva, G., Goltsov, A., Sorokin, A., Akman, O. E., Carl Troein, Millar, A. J., Goryanin, I. & Gilmore, S., 2013, In : Bioinformatics. 29, 5, p. 664-665

    Research output: Contribution to journalArticle

  13. 2012
  14. On evaluating models in Computational Morphodynamics.

    Henrik Jönsson, Gruel, J., Krupinski, P. & Carl Troein, 2012, In : Current Opinion in Plant Biology. 15, p. 103-110

    Research output: Contribution to journalArticle

  15. 2011
  16. Circadian rhythms persist without transcription in a eukaryote

    O'Neill, J. S., Van Ooijen, G., Dixon, L. E., Carl Troein, Corellou, F., Bouget, F-Y., Reddy, A. B. & Millar, A. J., 2011 Jan 27, In : Nature. 469, 7331, p. 554-558 5 p.

    Research output: Contribution to journalArticle

  17. Multiple light inputs to a simple clock circuit allow complex biological rhythms

    Carl Troein, Corellou, F., Dixon, L. E., van Ooijen, G., O'Neill, J. S., Bouget, F-Y. & Millar, A. J., 2011, In : Plant Journal. 66, p. 375-385

    Research output: Contribution to journalArticle

  18. Mutation-induced fold switching among lattice proteins.

    Holzgräfe, C., Anders Irbäck & Carl Troein, 2011, In : Journal of Chemical Physics. 135, 19, 195101.

    Research output: Contribution to journalArticle

  19. Proteasome function is required for biological timing throughout the twenty-four hour cycle

    van Ooijen, G., Dixon, L. E., Carl Troein & Millar, A. J., 2011, In : Current Biology. 21, 10, p. 869–875

    Research output: Contribution to journalArticle

  20. 2009
  21. Weather and Seasons Together Demand Complex Biological Clocks

    Carl Troein, Locke, J. C. W., Turner, M. S. & Millar, A. J., 2009 Dec 1, In : Current Biology. 19, 22, p. 1961-1964 4 p.

    Research output: Contribution to journalArticle

  22. 2007
  23. Gene Regulatory Networks: Dynamics and Stability

    Carl Troein, 2007, Department of Theoretical Physics, Lund University. 169 p.

    Research output: ThesisDoctoral Thesis (compilation)

  24. Is Transcriptional Regulation of Metabolic Pathways and Optimal Strategy for Fitness?

    Carl Troein, Dag Ahrén, Krogh, M. & Peterson, C., 2007, In : PLoS ONE. 2, 9

    Research output: Contribution to journalArticle

  25. 2006
  26. An introduction to BASE

    Carl Troein, Johan Vallon-Christersson & Saal, L. H., 2006, Methods in Enzymology: DNA Microarrays, Part B: Databases and DNA Microarrays, Part B: Databases and statistics. Kimmel, A. & Oliver, B. (eds.). Vol. 411. p. 99-119

    Research output: Chapter in Book/Report/Conference proceedingBook chapter

  27. An introduction to BioArray software environment

    Carl Troein, Johan Vallon-Christersson & Lao Saal, 2006, In : Methods in Enzymology. 411, p. 99-119

    Research output: Contribution to journalReview article

  28. Transcriptional dynamics of the embryonic stem cell switch

    Chickarmane, V., Carl Troein, Nuber, U., Sauro, H. M. & Peterson, C., 2006, In : PLoS Computational Biology. 2, 9, p. 1080-1092

    Research output: Contribution to journalArticle

  29. 2005
  30. Random maps and attractors in random Boolean networks

    Samuelsson, B. & Carl Troein, 2005, In : Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 72, 4, 046112.

    Research output: Contribution to journalArticle

  31. Signal transduction pathway profiling of individual tumor samples

    Breslin, T., Krogh, M., Peterson, C. & Carl Troein, 2005, In : BMC Bioinformatics. 6, 163

    Research output: Contribution to journalArticle

  32. 2004
  33. Genetic networks with canalyzing Boolean rules are always stable

    Kauffman, S., Peterson, C., Samuelsson, B. & Carl Troein, 2004, In : Proceedings of the National Academy of Sciences. 101, 49, p. 17102-17107

    Research output: Contribution to journalArticle

  34. 2003
  35. Random Boolean network models and the yeast transcriptional network

    Kauffman, S., Peterson, C., Samuelsson, B. & Carl Troein, 2003, In : Proceedings of the National Academy of Sciences. 100, 25, p. 14796-14799

    Research output: Contribution to journalArticle

  36. Superpolynomial growth in the number of attractors in Kauffman networks

    Samuelsson, B. & Carl Troein, 2003, In : Physical Review Letters. 90, 9, 098701.

    Research output: Contribution to journalArticle

  37. Superpolynomial growth in the number of attractors in Kauffman networks (conference report)

    Samuelsson, B. & Carl Troein, 2003, In : Acta Physica Polonica B. 34, 10, p. 5051-5061

    Research output: Contribution to journalArticle

  38. 2002
  39. Bioarray software environment: a platform for comprehensive management and analysis of microarray data

    Lao Saal, Carl Troein, Johan Vallon-Christersson, Sofia Gruvberger, Åke Borg & Peterson, C., 2002, In : Genome Biology. 3, 8, p. software0003.1-software0003.6 (2002)

    Research output: Contribution to journalArticle

  40. Enumerating designing sequences in the HP model

    Anders Irbäck & Carl Troein, 2002, In : Journal of Biological Physics. 28, p. 1-15

    Research output: Contribution to journalArticle