Johan Malmström

Professor, PhD
More filtering options
  1. Absolute quantification of microbial proteomes at different states by directed mass spectrometry

    Schmidt, A., Beck, M., Johan Malmström, Lam, H., Claassen, M., Campbell, D. & Aebersold, R., 2011 Jul 19, In : Molecular Systems Biology. 7, p. 510

    Research output: Contribution to journalArticle

  2. A Combined Shotgun and Targeted Mass Spectrometry Strategy for Breast Cancer Biomarker Discovery

    Martin Sjöström, Ossola, R., Breslin, T., Rinner, O., Malmstroem, L., Schmidt, A., Aebersold, R., Johan Malmström & Emma Niméus, 2015, In : Journal of Proteome Research. 14, 7, p. 2807-2818

    Research output: Contribution to journalArticle

  3. Advances in proteomic workflows for systems biology

    Johan Malmström, Lee, H. & Aebersold, R., 2007 Aug, In : Current Opinion in Biotechnology. 18, 4, p. 378-84 7 p.

    Research output: Contribution to journalArticle

  4. A high-confidence human plasma proteome reference set with estimated concentrations in PeptideAtlas

    Farrah, T., Deutsch, E. W., Omenn, G. S., Campbell, D. S., Sun, Z., Bletz, J. A., Mallick, P., Katz, J. E., Johan Malmström, Ossola, R., Watts, J. D., Lin, B., Zhang, H., Moritz, R. L. & Aebersold, R., 2011 Sep, In : Molecular & Cellular Proteomics. 10, 9, p. M110.006353

    Research output: Contribution to journalArticle

  5. A high-quality catalog of the Drosophila melanogaster proteome

    Brunner, E., Ahrens, C. H., Mohanty, S., Baetschmann, H., Loevenich, S., Potthast, F., Deutsch, E. W., Panse, C., de Lichtenberg, U., Rinner, O., Lee, H., Pedrioli, P. G. A., Malmstrom, J., Koehler, K., Schrimpf, S., Krijgsveld, J., Kregenow, F., Heck, A. J. R., Hafen, E., Schlapbach, R. & 1 othersAebersold, R., 2007 May, In : Nature Biotechnology. 25, 5, p. 576-83 8 p.

    Research output: Contribution to journalArticle

  6. Analysis of bacterial surface interactions with mass spectrometry-based proteomics

    Christofer Karlsson, Teleman, J. & Johan Malmström, 2017, Methods in Molecular Biology. Humana Press, Vol. 1535. p. 17-24 8 p. (Methods in Molecular Biology; vol. 1535).

    Research output: Chapter in Book/Report/Conference proceedingBook chapter

  7. A Novel Role for Pro-Coagulant Microvesicles in the Early Host Defense against Streptococcus pyogenes

    Oehmcke, S., Westman, J., Johan Malmström, Mörgelin, M., Olin, A., Kreikemeyer, B. & Heiko Herwald, 2013, In : PLoS Pathogens. 9, 8, e1003529.

    Research output: Contribution to journalArticle

  8. Antibody orientation at bacterial surfaces is related to invasive infection.

    Pontus Nordenfelt, Waldemarson, S., Adam Linder, Mörgelin, M., Christofer Karlsson, Johan Malmström & Lars Björck, 2012, In : Journal of Experimental Medicine. 209, 13, p. 2367-2381

    Research output: Contribution to journalArticle

  9. A quantitative Streptococcus pyogenes-human protein-protein interaction map reveals localization of opsonizing antibodies

    Lotta Happonen, Hauri, S., Svensson Birkedal, G., Christofer Karlsson, Therese de Neergaard, Khakzad, H., Pontus Nordenfelt, Wikström, M., Wisniewska, M., Lars Björck, Lars Malmström & Johan Malmström, 2019 Jun 21, In : Nature Communications. 10, 1, p. 2727

    Research output: Contribution to journalArticle

  10. Automated quality control system for LC-SRM setups.

    Teleman, J., Waldemarson, S., Johan Malmström & Fredrik Levander, 2013, In : Journal of Proteomics. 95, Online 11 April 2013, p. 77-83

    Research output: Contribution to journalArticle

  11. Automated Selected Reaction Monitoring Software for Accurate Label-Free Protein Quantification.

    Teleman, J., Christofer Karlsson, Waldemarson, S., Hansson, K. M., Peter James, Johan Malmström & Fredrik Levander, 2012, In : Journal of Proteome Research. 11, 7, p. 3766-3773

    Research output: Contribution to journalArticle

  12. Automated Workflow for Large-Scale Selected Reaction Monitoring Experiments

    Malmstrom, L., Johan Malmström, Selevsek, N., Rosenberger, G. & Aebersold, R., 2012, In : Journal of Proteome Research. 11, 3, p. 1644-1653

    Research output: Contribution to journalArticle

  13. Biosynthesis of dermatan sulfate: Chondroitin glucuronate C5-epimerase is identical to SART2.

    Marco Maccarana, Olander, B., Johan Malmström, Tiedemann, K., Aebersold, R., Lindahl, U., Li, J-P. & Anders Malmström, 2006, In : Journal of Biological Chemistry. 281, 17, p. 11560-11568

    Research output: Contribution to journalArticle

  14. Cancer associated proteins in blood plasma: Determining normal variation

    Stenemo, M., Teleman, J., Martin Sjöström, Grubb, G., Erik Malmström, Johan Malmström & Emma Niméus, 2016, In : Proteomics. 16, 13, p. 1928-1937 10 p.

    Research output: Contribution to journalArticle

  15. Chapter 14 Proteomics and remodeling of extracellular matrix in lung diseases

    Johan Malmström, 2005 Dec 1, Proteomics and Peptidomics: New Technology Platforms Elucidating Biology. Marko-Varga, V. (ed.). p. 535-556 22 p. (Comprehensive Analytical Chemistry; vol. 46).

    Research output: Chapter in Book/Report/Conference proceedingBook chapter

  16. Comparative functional analysis of the Caenorhabditis elegans and Drosophila melanogaster proteomes

    Schrimpf, S. P., Weiss, M., Reiter, L., Ahrens, C. H., Jovanovic, M., Johan Malmström, Brunner, E., Mohanty, S., Lercher, M. J., Hunziker, P. E., Aebersold, R., von Mering, C. & Hengartner, M. O., 2009 Mar 3, In : PLoS Biology. 7, 3, e48.

    Research output: Contribution to journalArticle

  17. Complete Removal of Extracellular IgG Antibodies in a Randomized Dose-Escalation Phase I Study with the Bacterial Enzyme IdeS - A Novel Therapeutic Opportunity.

    Winstedt, L., Järnum, S., Nordahl, E. A., Olsson, A., Runström, A., Bockermann, R., Christofer Karlsson, Johan Malmström, Samuelsson Palmgren, G., Malmqvist, U., Lars Björck & Kjellman, C., 2015, In : PLoS ONE. 10, 7, e0132011.

    Research output: Contribution to journalArticle

  18. Comprehensive Proteomic Characterization of Ontogenic Changes in Hematopoietic Stem and Progenitor Cells

    Maria Jassinskaja, Johansson, E., Trine Ahn Kristiansen, Hugo Åkerstrand, Sjöholm, K., Hauri, S., Johan Malmström, Joan Yuan & Jenny Hansson, 2017 Dec 12, In : Cell Reports. 21, 11, p. 3285-3297 13 p.

    Research output: Contribution to journalArticle

  19. Data Processing Has Major Impact on the Outcome of Quantitative Label-Free LC-MS Analysis

    Chawade, A., Sandin, M., Teleman, J., Johan Malmström & Fredrik Levander, 2015, In : Journal of Proteome Research. 14, 2, p. 676-687

    Research output: Contribution to journalArticle

  20. Data processing methods and quality control strategies for label-free LC-MS protein quantification.

    Sandin, M., Teleman, J., Johan Malmström & Fredrik Levander, 2014, In : Biochimica et biophysica acta. 1844, 1, p. 29-41

    Research output: Contribution to journalReview article

  21. Development of large-scale cross-linking mass spectrometry

    Barysz, H. M. & Johan Malmstroem, 2018, In : Molecular and Cellular Proteomics. 17, 6, p. 1055-1066

    Research output: Contribution to journalReview article

  22. Development of Phage-Based Antibody Fragment Reagents for Affinity Enrichment of Bacterial Immunoglobulin G Binding Proteins.

    Säll, A., Sjöholm, K., Waldemarson, S., Lotta Happonen, Christofer Karlsson, Persson, H. & Johan Malmström, 2015, In : Journal of Proteome Research. 14, 11, p. 4704-4713

    Research output: Contribution to journalArticle

  23. DIANA - algorithmic improvements for analysis of data-independent acquisition MS data.

    Teleman, J., Röst, H., Rosenberger, G., Schmitt, U., Malmström, L., Johan Malmström & Fredrik Levander, 2015, In : Bioinformatics. 31, 4, p. 555-562

    Research output: Contribution to journalArticle

  24. Dinosaur: A Refined Open-Source Peptide MS Feature Detector

    Teleman, J., Chawade, A., Sandin, M., Fredrik Levander & Johan Malmström, 2016 Jul 1, In : Journal of Proteome Research. 15, 7, p. 2143-2151 9 p.

    Research output: Contribution to journalArticle

  25. ESI and MALDI LC/MS-MS approaches for large scale protein, identification and quantification: Are they equivalent?

    Juhasz, P., Falick, A., Graber, A., Hattan, S., Khainovski, N., Marchese, J., Martin, S., Patterson, D., Williamson, B., J. Malmstrom, G. Westergren-Thorsson & G. Marko-Varga, 2002 Dec 1, p. 55-56. 2 p.

    Research output: Contribution to conferencePaper, not in proceeding

  26. Exploring the context of the lung proteome within the airway mucosa following allergen challenge.

    Fehniger, T. E., Sato-Folatre, J-G., Johan Malmström, Berglund, M., Lindberg, C., Brange, C., Lindberg, H. & Marko-Varga, G., 2004, In : Journal of Proteome Research. 3, 2, p. 307-320

    Research output: Contribution to journalReview article

  27. Functional and Structural Properties of a Novel Protein and Virulence Factor (sHIP) in Streptococcus pyogenes.

    Wisniewska, M., Lotta Happonen, Fredrik Kahn, Varjosalo, M., Malmström, L., Rosenberger, G., Christofer Karlsson, Cazzamali, G., Pozdnyakova, I., Inga-Maria Frick, Lars Björck, Streicher, W., Johan Malmström & Wikström, M., 2014, In : Journal of Biological Chemistry. 289, 26, p. 18175-18188

    Research output: Contribution to journalArticle

  28. Functional Proteome analysis of the molecular mechanism of (myo)fibroblast differentiation

    Johan Malmström, 2003, Johan Malmström, BMC C13, 221 84 Lund,. 209 p.

    Research output: ThesisDoctoral Thesis (compilation)

  29. Greedy de novo motif discovery to construct motif repositories for bacterial proteomes

    Khakzad, H., Johan Malmström & Lars Malmström, 2019 Apr 18, In : BMC Bioinformatics. 20, Suppl 4, 141.

    Research output: Contribution to journalArticle

  30. Improvements in Mass Spectrometry Assay Library Generation for Targeted Proteomics

    Teleman, J., Hauri, S. & Johan Malmström, 2017 Jul 7, In : Journal of Proteome Research. 16, 7, p. 2384-2392 9 p.

    Research output: Contribution to journalArticle

  31. Numerical compression schemes for proteomics mass spectrometry data.

    Teleman, J., Dowsey, A. W., Gonzalez-Galarza, F. F., Perkins, S., Pratt, B., Rost, H., Malmstrom, L., Johan Malmström, Jones, A. R., Deutsch, E. W. & Levander, F., 2014, In : Molecular & Cellular Proteomics. 13, 6, p. 1537-1542

    Research output: Contribution to journalArticle

Previous 1 2 Next