Research Portal

Find researchers, research outputs (e.g. publications), projects, infrastructures and units at Lund University

Analysing large-scale microscopy datasets with AI-based approaches

Project: Research › Interdisciplinary research, Internal collaboration (LU), National collaboration, International collaboration

Research areas and keywords

UKÄ subject classification

Basic Medicine
Bioinformatics (Computational Biology)
Mathematics

Keywords

Machine Learning, Deep Learning, Microscopy, Computer Vision

Description

In this project we are developing AI-based approaches for analysing large datasets with microscopy images generated by high-content imaging screens.

Status	Active
Effective start/end date	2018/11/28 → …

Collaborative partners

Lund University (lead)
National Bioinformatics Infrastructure Sweden (NBIS), SciLifeLab, Lund, Sweden. (Project partner)
Science for Life Laboratory (SciLifeLab)

Participants

Sonja Aits - MultiPark: Multidisciplinary research focused on Parkinson´s disease - BioCARE: Biomarkers in Cancer Medicine improving Health Care, Education and Innovation - Cell Death and Lysosomes (PI)
Karl Åström - ELLIIT: the Linköping-Lund initiative on IT and mobile communication - Mathematics (Faculty of Engineering) - eSSENCE: The e-Science Collaboration - Mathematical Imaging Group (PI)
Sara Maad Sasane - Mathematics (Faculty of Engineering) - Partial differential equations - eSSENCE: The e-Science Collaboration - ELLIIT: the Linköping-Lund initiative on IT and mobile communication (PI)
Oskolkov, Nikolay (Researcher)
Simpson, Kaylene - Victorian Centre for Functional Genomics (Researcher)
Kazemi Rashed, Salma - Cell Death and Lysosomes (Research student)
Lim, Jong Chan - Cell Death and Lysosomes (Research student)
Wählby, Carolina - Uppsala University (Researcher)

Show more...Show less

Related projects

(Part of)

AI Lund: Lund University AI Research

Kalle Åström, Jacek Malec, Stefan Larsson, Mattias Ohlsson, Christian Balkenius, Anamaria Dutceac Segesten, Jutta Haider, Robert Willim, Jonas Ledendal, Sonja Aits, Maria Hedlund, Jonas Wisbrant, Einar Heiberg, Elin Anna Topp, Jörn Janneck, Marcus Klang, Ingar Brinck & Olof Sundin

2018/01/01 → …

Project: Network › Interdisciplinary research, Internal collaboration (LU)

Understanding and therapeutic targeting of lysosome-dependent cell death

Sonja Aits, Kaylene Simpson, Ricky Johnstone, Nikolay Oskolkov & Charlotte Stadler

2016/12/01 → …

Project: Research