The Paleozoic Origin of Enzymatic Lignin Decomposition Reconstructed from 31 Fungal Genomes

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The Paleozoic Origin of Enzymatic Lignin Decomposition Reconstructed from 31 Fungal Genomes. / Floudas, Dimitrios; Binder, Manfred; Riley, Robert; Barry, Kerrie; Blanchette, Robert; Henrissat, Bernard; Martinez, Angel; Ottilar, Robert; Spatafora, Joseph; Yadav, Jagjit; Aerts, Andrea; Benoit, Isabelle; Boyd, Alex; Carlson, Alexis ; Copeland, Alex; Coutinho, Pedro; de Vries, Ronald; Ferreira, Patricia; Findley, Keisha; Foster, Brian; Gaskell, Jill; Glotzer, Dylan; Gorecki, Pawel; Heitman, Joseph; Hesse, Cedar; Hori, Chiaki; Igarashi, Kiyohiko; Jurgens, Joel; Kallen, Nathan; Kersten, Phil ; Kohler, Annegret; Kues, Ursula; Kumar, Arun; Kuo, Alan; LaButti, Kurt; Larrondo, Luis; Lindquist, Erika; Ling, Albee; Lombard, Vincent; Lucas, Susan; Lundell, Taina; Martin, Rachael; MacLaughlin, David; Morgenstern, Ingo; Morin, Emanuelle; Murat, Claude; Nagy, Laszlo; Nolan, Matt; Ohm, Robin; Patyshakuliyeva, Aleksrandrina ; Rokas, Antonis; Ruiz-Duenas, Francisco; Sabat, Grzegorz; Salamov, Asaf; Samejima, Masahiro; Schmutz, Jeremy; Slot, Jason C.; St. John, Franz ; Stenlid, Jan; San, Hui; Sun, Sheng; Syed, Khajamohiddin; Tsang, Andrian; Wiebenga, Ad; Young, Darcy; Pissabarro, Antonio; Eastwood, Daniel C. ; Martin, Francis; Cullen, Dan; Grigoriev, Igor V.; Hibbett, David S.

In: Science, Vol. 356, No. 6338, 29.06.2012, p. 1715-1719.

Research output: Contribution to journalArticle

Harvard

Floudas, D, Binder, M, Riley, R, Barry, K, Blanchette, R, Henrissat, B, Martinez, A, Ottilar, R, Spatafora, J, Yadav, J, Aerts, A, Benoit, I, Boyd, A, Carlson, A, Copeland, A, Coutinho, P, de Vries, R, Ferreira, P, Findley, K, Foster, B, Gaskell, J, Glotzer, D, Gorecki, P, Heitman, J, Hesse, C, Hori, C, Igarashi, K, Jurgens, J, Kallen, N, Kersten, P, Kohler, A, Kues, U, Kumar, A, Kuo, A, LaButti, K, Larrondo, L, Lindquist, E, Ling, A, Lombard, V, Lucas, S, Lundell, T, Martin, R, MacLaughlin, D, Morgenstern, I, Morin, E, Murat, C, Nagy, L, Nolan, M, Ohm, R, Patyshakuliyeva, A, Rokas, A, Ruiz-Duenas, F, Sabat, G, Salamov, A, Samejima, M, Schmutz, J, Slot, JC, St. John, F, Stenlid, J, San, H, Sun, S, Syed, K, Tsang, A, Wiebenga, A, Young, D, Pissabarro, A, Eastwood, DC, Martin, F, Cullen, D, Grigoriev, IV & Hibbett, DS 2012, 'The Paleozoic Origin of Enzymatic Lignin Decomposition Reconstructed from 31 Fungal Genomes', Science, vol. 356, no. 6338, pp. 1715-1719. https://doi.org/10.1126/science.1221748

APA

Floudas, D., Binder, M., Riley, R., Barry, K., Blanchette, R., Henrissat, B., Martinez, A., Ottilar, R., Spatafora, J., Yadav, J., Aerts, A., Benoit, I., Boyd, A., Carlson, A., Copeland, A., Coutinho, P., de Vries, R., Ferreira, P., Findley, K., ... Hibbett, D. S. (2012). The Paleozoic Origin of Enzymatic Lignin Decomposition Reconstructed from 31 Fungal Genomes. Science, 356(6338), 1715-1719. https://doi.org/10.1126/science.1221748

CBE

Floudas D, Binder M, Riley R, Barry K, Blanchette R, Henrissat B, Martinez A, Ottilar R, Spatafora J, Yadav J, Aerts A, Benoit I, Boyd A, Carlson A, Copeland A, Coutinho P, de Vries R, Ferreira P, Findley K, Foster B, Gaskell J, Glotzer D, Gorecki P, Heitman J, Hesse C, Hori C, Igarashi K, Jurgens J, Kallen N, Kersten P, Kohler A, Kues U, Kumar A, Kuo A, LaButti K, Larrondo L, Lindquist E, Ling A, Lombard V, Lucas S, Lundell T, Martin R, MacLaughlin D, Morgenstern I, Morin E, Murat C, Nagy L, Nolan M, Ohm R, Patyshakuliyeva A, Rokas A, Ruiz-Duenas F, Sabat G, Salamov A, Samejima M, Schmutz J, Slot JC, St. John F, Stenlid J, San H, Sun S, Syed K, Tsang A, Wiebenga A, Young D, Pissabarro A, Eastwood DC, Martin F, Cullen D, Grigoriev IV, Hibbett DS. 2012. The Paleozoic Origin of Enzymatic Lignin Decomposition Reconstructed from 31 Fungal Genomes. Science. 356(6338):1715-1719. https://doi.org/10.1126/science.1221748

MLA

Vancouver

Floudas D, Binder M, Riley R, Barry K, Blanchette R, Henrissat B et al. The Paleozoic Origin of Enzymatic Lignin Decomposition Reconstructed from 31 Fungal Genomes. Science. 2012 Jun 29;356(6338):1715-1719. https://doi.org/10.1126/science.1221748

Author

Floudas, Dimitrios ; Binder, Manfred ; Riley, Robert ; Barry, Kerrie ; Blanchette, Robert ; Henrissat, Bernard ; Martinez, Angel ; Ottilar, Robert ; Spatafora, Joseph ; Yadav, Jagjit ; Aerts, Andrea ; Benoit, Isabelle ; Boyd, Alex ; Carlson, Alexis ; Copeland, Alex ; Coutinho, Pedro ; de Vries, Ronald ; Ferreira, Patricia ; Findley, Keisha ; Foster, Brian ; Gaskell, Jill ; Glotzer, Dylan ; Gorecki, Pawel ; Heitman, Joseph ; Hesse, Cedar ; Hori, Chiaki ; Igarashi, Kiyohiko ; Jurgens, Joel ; Kallen, Nathan ; Kersten, Phil ; Kohler, Annegret ; Kues, Ursula ; Kumar, Arun ; Kuo, Alan ; LaButti, Kurt ; Larrondo, Luis ; Lindquist, Erika ; Ling, Albee ; Lombard, Vincent ; Lucas, Susan ; Lundell, Taina ; Martin, Rachael ; MacLaughlin, David ; Morgenstern, Ingo ; Morin, Emanuelle ; Murat, Claude ; Nagy, Laszlo ; Nolan, Matt ; Ohm, Robin ; Patyshakuliyeva, Aleksrandrina ; Rokas, Antonis ; Ruiz-Duenas, Francisco ; Sabat, Grzegorz ; Salamov, Asaf ; Samejima, Masahiro ; Schmutz, Jeremy ; Slot, Jason C. ; St. John, Franz ; Stenlid, Jan ; San, Hui ; Sun, Sheng ; Syed, Khajamohiddin ; Tsang, Andrian ; Wiebenga, Ad ; Young, Darcy ; Pissabarro, Antonio ; Eastwood, Daniel C. ; Martin, Francis ; Cullen, Dan ; Grigoriev, Igor V. ; Hibbett, David S. / The Paleozoic Origin of Enzymatic Lignin Decomposition Reconstructed from 31 Fungal Genomes. In: Science. 2012 ; Vol. 356, No. 6338. pp. 1715-1719.

RIS

TY - JOUR

T1 - The Paleozoic Origin of Enzymatic Lignin Decomposition Reconstructed from 31 Fungal Genomes

AU - Floudas, Dimitrios

AU - Binder, Manfred

AU - Riley, Robert

AU - Barry, Kerrie

AU - Blanchette, Robert

AU - Henrissat, Bernard

AU - Martinez, Angel

AU - Ottilar, Robert

AU - Spatafora, Joseph

AU - Yadav, Jagjit

AU - Aerts, Andrea

AU - Benoit, Isabelle

AU - Boyd, Alex

AU - Carlson, Alexis

AU - Copeland, Alex

AU - Coutinho, Pedro

AU - de Vries, Ronald

AU - Ferreira, Patricia

AU - Findley, Keisha

AU - Foster, Brian

AU - Gaskell, Jill

AU - Glotzer, Dylan

AU - Gorecki, Pawel

AU - Heitman, Joseph

AU - Hesse, Cedar

AU - Hori, Chiaki

AU - Igarashi, Kiyohiko

AU - Jurgens, Joel

AU - Kallen, Nathan

AU - Kersten, Phil

AU - Kohler, Annegret

AU - Kues, Ursula

AU - Kumar, Arun

AU - Kuo, Alan

AU - LaButti, Kurt

AU - Larrondo, Luis

AU - Lindquist, Erika

AU - Ling, Albee

AU - Lombard, Vincent

AU - Lucas, Susan

AU - Lundell, Taina

AU - Martin, Rachael

AU - MacLaughlin, David

AU - Morgenstern, Ingo

AU - Morin, Emanuelle

AU - Murat, Claude

AU - Nagy, Laszlo

AU - Nolan, Matt

AU - Ohm, Robin

AU - Patyshakuliyeva, Aleksrandrina

AU - Rokas, Antonis

AU - Ruiz-Duenas, Francisco

AU - Sabat, Grzegorz

AU - Salamov, Asaf

AU - Samejima, Masahiro

AU - Schmutz, Jeremy

AU - Slot, Jason C.

AU - St. John, Franz

AU - Stenlid, Jan

AU - San, Hui

AU - Sun, Sheng

AU - Syed, Khajamohiddin

AU - Tsang, Andrian

AU - Wiebenga, Ad

AU - Young, Darcy

AU - Pissabarro, Antonio

AU - Eastwood, Daniel C.

AU - Martin, Francis

AU - Cullen, Dan

AU - Grigoriev, Igor V.

AU - Hibbett, David S.

PY - 2012/6/29

Y1 - 2012/6/29

N2 - Wood is a major pool of organic carbon that is highly resistant to decay, owing largely to the presence of lignin. The only organisms capable of substantial lignin decay are white rot fungi in the Agaricomycetes, which also contains non–lignin-degrading brown rot and ectomycorrhizal species. Comparative analyses of 31 fungal genomes (12 generated for this study) suggest that lignin-degrading peroxidases expanded in the lineage leading to the ancestor of the Agaricomycetes, which is reconstructed as a white rot species, and then contracted in parallel lineages leading to brown rot and mycorrhizal species. Molecular clock analyses suggest that the origin of lignin degradation might have coincided with the sharp decrease in the rate of organic carbon burial around the end of the Carboniferous period.

AB - Wood is a major pool of organic carbon that is highly resistant to decay, owing largely to the presence of lignin. The only organisms capable of substantial lignin decay are white rot fungi in the Agaricomycetes, which also contains non–lignin-degrading brown rot and ectomycorrhizal species. Comparative analyses of 31 fungal genomes (12 generated for this study) suggest that lignin-degrading peroxidases expanded in the lineage leading to the ancestor of the Agaricomycetes, which is reconstructed as a white rot species, and then contracted in parallel lineages leading to brown rot and mycorrhizal species. Molecular clock analyses suggest that the origin of lignin degradation might have coincided with the sharp decrease in the rate of organic carbon burial around the end of the Carboniferous period.

U2 - 10.1126/science.1221748

DO - 10.1126/science.1221748

M3 - Article

VL - 356

SP - 1715

EP - 1719

JO - Science (New York, N.Y.)

JF - Science (New York, N.Y.)

SN - 1095-9203

IS - 6338

ER -