Bioinformatics, 1367-4803

Tidskrift

Fler filtreringsmöjligheter
  1. 2020
  2. Benchmarking immunoinformatic tools for the analysis of antibody repertoire sequences

    Erand Smakaj, Lmar Babrak, Mats Ohlin, Mikhail Shugay, Bryan Briney, Deniz Tosoni, Christopher Galli, Vendi Grobelsek, Igor D'Angelo, Branden Olson, Sai Reddy, Victor Greiff, Johannes Trück, Susanna Marquez, William Lees & Enkelejda Miho, 2020, I : Bioinformatics (Oxford, England). 36, 6, s. 1731-1739 9 s.

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  3. 2019
  4. MPRAscore: robust and non-parametric analysis of massively parallel reporter assays

    Abhishek Niroula, Ram Ajore & Björn Nilsson, 2019 dec 15, I : Bioinformatics (Oxford, England). 35, 24, s. 5351-5353 3 s.

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  5. RTNduals an R/Bioconductor package for analysis of co-regulation and inference of dual regulons

    Vinicius S. Chagas, Clarice S. Groeneveld, Kelin G. Oliveira, Sheyla Trefflich, Rodrigo C. de Almeida, Bruce A.J. Ponder, Kerstin B. Meyer, Steven J.M. Jones, A. Gordon Robertson & Mauro A.A. Castro, 2019 dec 15, I : Bioinformatics (Oxford, England). 35, 24, s. 5357-5358 2 s.

    Forskningsoutput: TidskriftsbidragLetter

  6. Pair Matcher (PaM): fast model-based optimization of treatment/case-control matches

    Eran Elhaik & Desmond M Ryan, 2019 jul 1, I : Bioinformatics (Oxford, England). 35, 13, s. 2243-2250

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  7. SMSSVD: SubMatrix Selection Singular Value Decomposition

    Rasmus Henningsson & Magnus Fontes, 2019, I : Bioinformatics (Oxford, England). 35, 3, s. 478-486 9 s.

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  8. Uncertainty quantification, propagation and characterization by Bayesian analysis combined with global sensitivity analysis applied to dynamical intracellular pathway models

    Olivia Eriksson, Alexandra Jauhiainen, Sara Maad Sasane, Andrei Kramer, Anu G. Nair, Carolina Sartorius & Jeanette Hellgren Kotaleski, 2019, I : Bioinformatics (Oxford, England). 35, 2, s. 284-292 9 s.

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  9. 2018
  10. Using standard microbiome reference groups to simplify beta-diversity analyses and facilitate independent validation

    Marlena Maziarz, Ruth M. Pfeiffer, Yunhu Wan & Mitchell H. Gail, 2018 okt 1, I : Bioinformatics. 34, 19, s. 3249-3257 9 s.

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  11. 2017
  12. LoFtool: a gene intolerance score based on loss-of-function variants in 60 706 individuals

    João Fadista, Nikolay Oskolkov, Ola Hansson & Leif Groop, 2017, I : Bioinformatics. 33, 4, s. 471-474

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  13. 2016
  14. PON-Sol: Prediction of effects of amino acid substitutions on protein solubility

    Yang Yang, Abhishek Niroula, Bairong Shen & Mauno Vihinen, 2016 jul 1, I : Bioinformatics. 32, 13, s. 2032-2034

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  15. 2015
  16. Automatic determination of NET (neutrophil extracellular traps) coverage in fluorescent microscopy images

    Luis Pedro Coelho, Catarina Pato, Ana Friães, Ariane Neumann, Maren von Köckritz-Blickwede, Mário Ramirez & João André Carriço, 2015 jul 15, I : Bioinformatics. 31, 14, s. 2364-70 7 s.

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  17. DIANA - algorithmic improvements for analysis of data-independent acquisition MS data.

    Johan Teleman, Hannes Röst, George Rosenberger, Uwe Schmitt, Lars Malmström, Johan Malmström & Fredrik Levander, 2015, I : Bioinformatics. 31, 4, s. 555-562

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  18. EVpedia: A Community Web Portal for Extracellular Vesicles Research.

    Dae-Kyum Kim, Jaewook Lee, Sae Rom Kim, Dong-Sic Choi, Yae Jin Yoon, Ji Hyun Kim, Gyeongyun Go, Dinh Nhung, Kahye Hong, Su Chul Jang, Si-Hyun Kim, Kyong-Su Park, Oh Youn Kim, Hyun Taek Park, Ji Hye Seo, Elena Aikawa, Monika Baj-Krzyworzeka, Bas W M van Balkom, Mattias Belting, Lionel Blanc & 75 andra, Vincent Bond, Antonella Bongiovanni, Francesc E Borràs, Luc Buée, Edit I Buzás, Lesley Cheng, Aled Clayton, Emanuele Cocucci, Charles S Dela Cruz, Dominic M Desiderio, Dolores Di Vizio, Karin Ekström, Juan M Falcon-Perez, Chris Gardiner, Bernd Giebel, David W Greening, Julia Christina Gross, Dwijendra Gupta, An Hendrix, Andrew F Hill, Michelle M Hill, Esther Nolte-'t Hoen, Do Won Hwang, Jameel Inal, Medicharla V Jagannadham, Muthuvel Jayachandran, Young-Koo Jee, Malene Jørgensen, Kwang Pyo Kim, Yoon-Keun Kim, Thomas Kislinger, Cecilia Lässer, Dong Soo Lee, Hakmo Lee, Johannes van Leeuwen, Thomas Lener, Ming-Lin Liu, Jan Lötvall, Antonio Marcilla, Suresh Mathivanan, Andreas Möller, Jess Morhayim, François Mullier, Irina Nazarenko, Rienk Nieuwland, Diana N Nunes, Ken Pang, Jaesung Park, Tushar Patel, Gabriella Pocsfalvi, Hernando Del Portillo, Ulrich Putz, Marcel I Ramirez, Marcio L Rodrigues, Tae-Young Roh, Felix Royo, Susmita Sahoo, Raymond Schiffelers, Shivani Sharma, Pia Siljander, Richard J Simpson, Carolina Soekmadji, Philip Stahl, Allan Stensballe, Ewa Stępień, Hidetoshi Tahara, Arne Trummer, Hadi Valadi, Laura J Vella, Sun Nyunt Wai, Kenneth Witwer, María Yáñez-Mó, Hyewon Youn, Reinhard Zeidler & Yong Song Gho, 2015, I : Bioinformatics. 31, 6, s. 933-939

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  19. 2013
  20. SBSI: an extensible distributed software infrastructure for parameter estimation in systems biology

    Richard Adams, Allan Clark, Azusa Yamaguchi, Neil Hanlon, Nikos Tsorman, Shakir Ali, Galina Lebedeva, Alexey Goltsov, Anatoly Sorokin, Ozgur E. Akman, Carl Troein, Andrew J. Millar, Igor Goryanin & Stephen Gilmore, 2013, I : Bioinformatics. 29, 5, s. 664-665

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  21. Ultranet: efficient solver for the sparse inverse covariance selection problem in gene network modeling.

    Linnea Järvstråt, M Johansson, Urban Gullberg & B. Nilsson, 2013, I : Bioinformatics. 29, 4, s. 511-512

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  22. 2012
  23. Analysis of case-control association studies with known risk variants

    Noah Zaitlen, Bogdan Pasaniuc, Nick Patterson, Samuela Pollack, Benjamin Voight, Leif Groop, David Altshuler, Brian E. Henderson, Laurence N. Kolonel, Loic Le Marchand, Kevin Waters, Christopher A. Haiman, Barbara E. Stranger, Emmanouil T. Dermitzakis, Peter Kraft & Alkes L. Price, 2012, I : Bioinformatics. 28, 13, s. 1729-1737

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  24. 2009
  25. Modified variational bayes EM estimation of hidden markov tree model of cell lineages

    Victor Olariu, Daniel Coca, Stephen A. Billings, Peter Tonge, Paul Gokhale, Peter W. Andrews & Visakan Kadirkamanathan, 2009 nov 1, I : Bioinformatics. 25, 21, s. 2824-2830 7 s.

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  26. RAMI: a tool for identification and characterization of phylogenetic clusters in microbial communities

    Thomas Pommier, Bjorn Canback, Per Lundberg, Ake Hagstrom & Anders Tunlid, 2009, I : Bioinformatics. 25, 6, s. 736-742

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  27. Ultrasome: efficient aberration caller for copy number studies of ultra-high resolution

    Björn Nilsson, Mikael Johansson, Fatima Al-Shahrour, Anne E. Carpenter & Benjamin L. Ebert, 2009, I : Bioinformatics. 25, 8, s. 1078-1079

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  28. 2008
  29. Model-based prediction of sequence alignment quality.

    Virpi Ahola, Tero Aittokallio, Mauno Vihinen & Esa Uusipaikka, 2008, I : Bioinformatics. 24, 19, s. 2165-2171

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  30. 2007
  31. Continuous-index hidden Markov modelling of array CGH copy number data.

    Susann Stjernqvist, Tobias Rydén, Martin Sköld & Johan Staaf, 2007, I : Bioinformatics. 23, s. 1006-1014

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  32. Multiple spaced seeds for homology search

    Lucian Ilie & Silvana Ilie, 2007, I : Bioinformatics. 23, 22, s. 2969-2977

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  33. Regression analysis and modelling of data acquisition for SELDI-TOF mass spectrometry.

    Martin Sköld, Tobias Rydén, Viktoria Samuelsson, Charlotte Welinder, Lars Ekblad, Håkan Olsson & Bo Baldetorp, 2007, I : Bioinformatics. 23, 11, s. 1401-1409

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  34. Robust smooth segmentation approach for array CGH data analysis

    J Huang, Arief Gusnanto, Kathleen O'Sullivan, Johan Staaf, Åke Borg & Yudi Pawitan, 2007, I : Bioinformatics. 23, 18, s. 2463-2469

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  35. 2005
  36. CoGenT++: an extensive and extensible data environment for computational genomics

    Leon Goldovsky, Paul Janssen, Dag Ahrén, Benjamin Audit, Ildefonso Cases, Nikos Darzentas, Anton Enright, Núria López-Bigas, José Peregrin-Alvarez, Mike Smith, Sophia Tsoka, Victor Kunin & Christos Ouzounis, 2005, I : Bioinformatics. 21, 19, s. 3806-3810

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  37. Modeling the organization of the WUSCHEL expression domain in the shoot apical meristem

    Henrik Jönsson, M Heisler, GV Reddy, V Agrawal, V Gor, BE Shapiro, E Mjolsness & EM Meyerowitz, 2005, I : Bioinformatics. 21, Suppl 1, s. I232-I240

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  38. PROTEIOS: an open source proteomics initiative

    Per Gärdén, Rikard Alm & Jari Häkkinen, 2005, I : Bioinformatics. 21, 9, s. 2085-2087

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  39. 2004
  40. ACID: a database for microarray clone information

    Markus Ringnér, Srinivas Veerla, S Andersson, Johan Staaf & Jari Häkkinen, 2004, I : Bioinformatics. 20, 14, s. 2305-2306

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  41. Approximate geodesic distances reveal biologically relevant structures in microarray data

    Jens Nilsson, Thoas Fioretos, Mattias Höglund & Magnus Fontes, 2004, I : Bioinformatics. 20, 6, s. 874-880

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  42. Modular, scriptable and automated analysis tools for high-throughput peptide mass fingerprinting

    J Samuelsson, D Dalevi, Fredrik Levander & T Rognvaldsson, 2004, I : Bioinformatics. 20, 18, s. 3628-3635

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  43. 2003
  44. Efficient estimation of emission probabilities in profile hidden Markov models.

    Virpi Ahola, Tero Aittokallio, Esa Uusipaikka & Mauno Vihinen, 2003, I : Bioinformatics. 19, 18, s. 2359-2368

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  45. RankViaContact: ranking and visualization of amino acid contacts.

    Bairong Shen & Mauno Vihinen, 2003, I : Bioinformatics. 19, 16, s. 2161-2162

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  46. 2002
  47. Binary tree-structured vector quantization approach to clustering and visualizing microarray data

    M. Sultan, D. A. Wigle, C. A. Cumbaa, M. Maziarz, J. Glasgow, M. S. Tsao & I. Jurisica, 2002 jan 1, I : Bioinformatics. 18, SUPPL. 1

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  48. A novel approach to local reliability of sequence alignments.

    Maximilian Schlosshauer & Mattias Ohlsson, 2002, I : Bioinformatics. 18, 6, s. 847-854

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  49. 2001
  50. BioWAP, mobile Internet service for bioinformatics

    P Riikonen, J Boberg, T Salakoski & Mauno Vihinen, 2001, I : Bioinformatics. 17, 9, s. 855-856

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  51. 1999
  52. MUTbase: maintenance and analysis of distributed mutation databases

    P Riikonen & Mauno Vihinen, 1999, I : Bioinformatics. 15, 10, s. 852-859

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  53. 1995
  54. MIST - A user-friendly metabolic simulator

    M Ehlde & Guido Zacchi, 1995, I : Computer Applications in the Biosciences. 11, 2, s. 201-207

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  55. 1992
  56. MULTICOMP - A PROGRAM PACKAGE FOR MULTIPLE SEQUENCE COMPARISON

    Mauno Vihinen, A EURANTO, P LUOSTARINEN & O NEVALAINEN, 1992, I : Computer Applications in the Biosciences. 8, 1, s. 35-38

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  57. 1988
  58. AN ALGORITHM FOR SIMULTANEOUS COMPARISON OF SEVERAL SEQUENCES

    Mauno Vihinen, 1988, I : Computer Applications in the Biosciences. 4, 1, s. 89-92

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift