Journal of Computational Chemistry, 1096-987X

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  1. Molcas 8: New capabilities for multiconfigurational quantum chemical calculations across the periodic table.

    Francesco Aquilante, Jochen Autschbach, Rebecca K Carlson, Liviu F Chibotaru, Mickaël G Delcey, Luca De Vico, Ignacio Fdez Galván, Nicolas Ferré, Luis Manuel Frutos, Laura Gagliardi, Marco Garavelli, Angelo Giussani, Chad E Hoyer, Giovanni Li Manni, Hans Lischka, Dongxia Ma, Per-Åke Malmqvist, Thomas Müller, Artur Nenov, Massimo Olivucci & 18 andra, Thomas Bondo Pedersen, Daoling Peng, Felix Plasser, Ben Pritchard, Markus Reiher, Ivan Rivalta, Igor Schapiro, Javier Segarra-Martí, Michael Stenrup, Donald G Truhlar, Liviu Ungur, Alessio Valentini, Steven Vancoillie, Valera Veryazov, Victor Vysotskiy, Oliver Weingart, Felipe Zapata & Roland Lindh, 2015, I: Journal of Computational Chemistry.

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  2. Software News and Update MOLCAS 7: The Next Generation

    Francesco Aquilante, Luca De Vico, Nicolas Ferre, Giovanni Ghigo, Per-Åke Malmqvist, Pavel Neogrady, Thomas Bondo Pedersen, Michal Pitonak, Markus Reiher, Björn Roos, Luis Serrano-Andres, Miroslav Urban, Valera Veryazov & Roland Lindh, 2010, I: Journal of Computational Chemistry. 31, 1, s. 224-247

    Forskningsoutput: TidskriftsbidragÖversiktsartikel

  3. PHAISTOS: A framework for Markov chain Monte Carlo simulation and inference of protein structure.

    Wouter Boomsma, Jes Frellsen, Tim Harder, Sandro Bottaro, Kristoffer E Johansson, Pengfei Tian, Kasper Stovgaard, Christian Andreetta, Simon Olsson, Jan B Valentin, Lubomir D Antonov, Anders S Christensen, Mikael Borg, Jan H Jensen, Kresten Lindorff-Larsen, Jesper Ferkinghoff-Borg & Thomas Hamelryck, 2013, I: Journal of Computational Chemistry. 34, 19, s. 1697-1705

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  4. Stepwise Disproportionation in Polyelectrolyte Complexes

    R. S. Dias, Per Linse & A. A. C. C. paisi, 2011, I: Journal of Computational Chemistry. 32, 12, s. 2697-2707

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  5. Binding affinities by alchemical perturbation using QM/MM with a large QM system and polarizable MM model.

    Samuel Genheden, Ulf Ryde & Pär Söderhjelm, 2015, I: Journal of Computational Chemistry. 36, 28, s. 2114-2124

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  6. How to obtain statistically converged MM/GBSA results.

    Samuel Genheden & Ulf Ryde, 2010, I: Journal of Computational Chemistry. 31, Online 13 Jul 2009, s. 837-846

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  7. A comparison of different initialization protocols to obtain statistically independent molecular dynamics simulations.

    Samuel Genheden & Ulf Ryde, 2011, I: Journal of Computational Chemistry. 32, 2, s. 187-195

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  8. Inclusion of the quadrupole moment when describing polarization. The effect of the dipole-quadrupole polarizability.

    Asbjörn Holt & Gunnar Karlström, 2008, I: Journal of Computational Chemistry. 29, 12, s. 2033-2038

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  9. A NEMO potential that includes the dipole-quadrupole and quadrupole-quadrupole polarizability.

    Asbjörn Holt, Jonas Boström, Gunnar Karlström & Roland Lindh, 2010, I: Journal of Computational Chemistry. 31, 8, s. 1583-1591

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  10. Induction correction model for rotation of two or three dihedral angles.

    Asbjörn Holt & Gunnar Karlström, 2008, I: Journal of Computational Chemistry. 29, 12, s. 1905-1911

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  11. An intramolecular induction correction model of the molecular dipole moment.

    Asbjörn Holt & Gunnar Karlström, 2008, I: Journal of Computational Chemistry. 29, 7, s. 1084-1091

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  12. PROFASI: A Monte Carlo simulation package for protein folding and aggregation

    Anders Irbäck & Sandipan Mohanty, 2006, I: Journal of Computational Chemistry. 27, 13, s. 1548-1555

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  13. A semiempirical approach to ligand-binding affinities: Dependence on the Hamiltonian and corrections.

    Paulius Mikulskis, Samuel Genheden, Karin Wichmann & Ulf Ryde, 2012, I: Journal of Computational Chemistry. 33, 12, s. 1179-1189

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  14. Can MM/GBSA calculations be sped up by system truncation?

    Majda Misini Ignjatović, Paulius Mikulskis, Pär Söderhjelm & Ulf Ryde, 2018 mar 15, I: Journal of Computational Chemistry. 39, 7, s. 361-372 12 s.

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  15. Confined polyelectrolytes: The complexity of a simple system.

    Sandra C C Nunes, Marie Skepö & Alberto A C C Pais, 2015, I: Journal of Computational Chemistry. 36, 21, s. 1579-1586

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  16. Converging ligand-binding free energies obtained with free-energy perturbations at the quantum mechanical level

    Martin A. Olsson, Pär Söderhjelm & Ulf Ryde, 2016 jun 30, I: Journal of Computational Chemistry. 37, 17, s. 1589-1600 12 s.

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  17. INDO Calculations of Small Copper Clusters, and CO Adsorbed on Copper (100) Surfaces

    Petter Persson, J. Bustad & M. C. Zerner, 2000, I: Journal of Computational Chemistry. 21, 14, s. 1221-1228

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  18. MOLSIM: A modular molecular simulation software.

    Jurij Reščič & Per Linse, 2015, I: Journal of Computational Chemistry. 36, 16, s. 1259-1274

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  19. The reaction mechanism of iron and manganese superoxide dismutases studied by theoretical calculations

    Lubomir Rulisek, Kasper Jensen, Kristoffer Lundgren & Ulf Ryde, 2006, I: Journal of Computational Chemistry. 27, 12, s. 1398-1414

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  20. Quantum chemical geometry optimizations in proteins using crystallographic raw data.

    Ulf Ryde, Lars Olsen & Kristina Nilsson, 2002, I: Journal of Computational Chemistry. 23, 11, s. 1058-1070

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  21. Mechanism and rate constants of the CH2 + CH2CO reactions in triplet and singlet states: A theoretical study

    Anna S. Savchenkova, Alexander S. Semenikhin, Ivan V. Chechet, Sergey G. Matveev, Alexander A. Konnov & Alexander M. Mebel, 2019 jan 15, I: Journal of Computational Chemistry. 40, 2, s. 387-399

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  22. Restrained point-charge models for disaccharides

    E Sigfridsson, Ulf Ryde & BL Bush, 2002, I: Journal of Computational Chemistry. 23, 3, s. 351-364

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  23. Comparison of methods for deriving atomic charges from the electrostatic potential and moments

    Emma Sigfridsson & Ulf Ryde, 1998 mar, I: Journal of Computational Chemistry. 19, 4, s. 377-395 19 s.

    Forskningsoutput: TidskriftsbidragÖversiktsartikel

  24. Conformational dependence of charges in protein simulations.

    Pär Söderhjelm & Ulf Ryde, 2009, I: Journal of Computational Chemistry. 30, 5, s. 750-760

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

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