Journal of Proteome Research, 1535-3893

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  1. ENSAM: Europium Nanoparticles for Signal Enhancement of Antibody Microarrays on Nanoporous Silicon.

    Järås, K., Tajudin, A., Ressine, A., Soukka, T., György Marko-Varga, Anders Bjartell, Johan Malm, Thomas Laurell & Hans Lilja, 2008, I : Journal of Proteome Research. 7, s. 1308-1314

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  2. Aptamer microarray mediated capture and mass spectrometry identification of biomarker in serum samples.

    Ji-Young, A., Lee, S. W., Kang, H. S., Jo, M., Lee, D-K., Thomas Laurell & Kim, S., 2010, I : Journal of Proteome Research. 9, 11, s. 5568-5573

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  3. The protein expression of Streptococcus pyogenes is significantly influenced by human plasma.

    Johansson, B., Fredrik Levander, von Pawel-Rammingen, U., Berggård, T., Lars Björck & Peter James, 2005, I : Journal of Proteome Research. 4, 6, s. 2302-2311

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  4. Comparative Time-Dependent Analysis of Potential Inflammation Biomarkers in Lymphoma-Bearing SJL Mice.

    Monica Kåredal, Bhat, V., Babu, I., Wishnok, J. & Tannenbaum, S., 2007, I : Journal of Proteome Research. 6, 5, s. 1735-1744

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  5. Time-Dependent Proteomic iTRAQ Analysis of Nasal Lavage of Hairdressers Challenged by Persulfate.

    Monica Kåredal, Mörtstedt, H., Jeppsson, M., Diab, K., Jörn Nielsen, Jönsson, B. A. & Christian Lindh, 2010, I : Journal of Proteome Research. okt, s. 5620-5628

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  6. A Clinician View and Experience of Proteomic Studies in the Light of Lung Cancer in Japanese Healthcare

    Kato, H., Nishimura, T., Hirano, T., Nomura, M., Tojo, H., Fujii, K., Kawamura, T., Mikami, S., Kihara, M., Bando, Y., Tsuboi, M., Ikeda, N. & György Marko-Varga, 2011, I : Journal of Proteome Research. 10, 1, s. 51-57

    Forskningsoutput: TidskriftsbidragDebate/Note/Editorial

  7. FK506, an Immunosuppressive Drug, Induces Autophagy by Binding to the V-ATPase Catalytic Subunit A in Neuronal Cells

    Kim, D., Hwang, H. Y., Kim, Y. J., Lee, J. Y., Yoo, J. S., György Marko-Varga & Kwon, H. J., 2017 jan 6, I : Journal of Proteome Research. 16, 1, s. 55-64 10 s.

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  8. Multimodel Pathway Enrichment Methods for Functional Evaluation of Expression Regulation.

    Kirik, U., Cifani, P., Albrekt, A-S., Malin Lindstedt, Anders Heyden & Fredrik Levander, 2012, I : Journal of Proteome Research. 11, 5, s. 2955-2967

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  9. A probabilistic treatment of the missing spot problem in 2D gel electrophoresis experiments

    Krogh, M., Celine Fernandez, Teilum, M., Bengtsson, S. & Peter James, 2007, I : Journal of Proteome Research. 6, 8, s. 3335-3343

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  10. Specific haptoglobin expression in bronchoalveolar lavage during differentiation of circulating fibroblast progenitor cells in mild asthma

    Larsen, K., Macleod, D., Nihlberg, K., Gürcan, E., Leif Bjermer, György Marko-Varga & Gunilla Westergren-Thorsson, 2006, I : Journal of Proteome Research. 5, 6, s. 1479-1483

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  11. Characterization of the Lipid Droplet Proteome of a Clonal Insulin-producing β-Cell Line (INS-1 832/13).

    Sara Larsson, Resjö, S., Maria Gomez, James, P. & Cecilia Holm, 2012, I : Journal of Proteome Research. 11, 2, s. 1264-1273

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  12. Integrated Chromosome 19 Transcriptomic and Proteomic Datasets Derived from Six Glioma-Derived Cancer Stem Cell Lines

    Lichti, C., Liu, H., Shavkunov, A. S., Mostovenko, E., Sulman, E. P., Ezhilarasan, R., Wang, Q., Kroes, R., Moskal, J. C., Fenyö, D., Oksuz, B. A., Conrad, C. A., Lang, F. F., Berven, F. S., Végvári, Á., Melinda Rezeli, György Marko-Varga, Hober, S. & Nilsson, C. L., 2014, I : Journal of Proteome Research. 13, 1, s. 191-199

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  13. Systematic Identification of Single Amino Acid Variants in Glioma Stem-Cell-Derived Chromosome 19 Proteins

    Lichti, C., Mostovenko, E., Wadsworth, P., Lynch, G., Pettitt, M., Sulman, E., Wang, Q., Lang, F., Melinda Rezeli, György Marko-Varga, Végvári, Á. & Nilsson, C., 2015, I : Journal of Proteome Research. 14, 2, s. 778-786

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  14. A modified database search strategy leads to improved identification of in vitro brominated peptides spiked into a complex proteomic sample

    Liu, H., Lichti, C. F., Mirfattah, B., Frahm, J. & Carol L Nilsson, 2013 sep 6, I : Journal of Proteome Research. 12, 9, s. 4248-54 7 s.

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  15. Quantitative proteomic analysis of microdissected breast cancer tissues: comparison of label-free and SILAC-based quantification with shotgun, directed, and targeted MS approaches

    Liu, N. Q., Dekker, L. J. M., Stingl, C., Güzel, C., Tommaso De Marchi, Martens, J. W. M., Foekens, J. A., Luider, T. M. & Umar, A., 2013 okt 4, I : Journal of Proteome Research. 12, 10, s. 4627-41

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  16. Blood Plasma Reference Material – A Global Resource for Proteomic Research

    Johan Malm, Danmyr, P., Nilsson, R., Roger Appelqvist, Végvári, Á. & György Marko-Varga, 2013, I : Journal of Proteome Research. 12, 7, s. 3087-3092

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  17. Automated Workflow for Large-Scale Selected Reaction Monitoring Experiments

    Malmstrom, L., Johan Malmström, Selevsek, N., Rosenberger, G. & Aebersold, R., 2012, I : Journal of Proteome Research. 11, 3, s. 1644-1653

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  18. Proteomic 2DE database for spot selection, automated annotation, and data analysis

    Malmstrom, L., Johan Malmström, György Marko-Varga & Gunilla Westergren-Thorsson, 2002, I : Journal of Proteome Research. 1, 2, s. 135-138

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  19. Proteome annotations and identifications of the human pulmonary fibroblast.

    Johan Malmström, Larsen, K., Lars Malmström, Ellen Tufvesson, Parker, K., Marchese, J., Williamson, B., Hattan, S., Patterson, D., Martin, S., Graber, A., Juhasz, H. P., Gunilla Westergren-Thorsson & György Marko-Varga, 2004, I : Journal of Proteome Research. 3, 3, s. 525-537

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  20. Optimized peptide separation and identification for mass spectrometry based proteomics via free-flow electrophoresis

    Johan Malmström, Lee, H., Nesvizhskii, A. I., Shteynberg, D., Mohanty, S., Brunner, E., Ye, M., Weber, G., Eckerskorn, C. & Aebersold, R., 2006 sep, I : Journal of Proteome Research. 5, 9, s. 2241-9 9 s.

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  21. A First Step Toward Completion of a Genome-Wide Characterization of the Human Proteome.

    György Marko-Varga, Omenn, G. S., Paik, Y-K. & Hancock, W. S., 2013, I : Journal of Proteome Research. 12, 1, s. 1-5

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  22. Biorepository Regulatory Frameworks: Building Parallel Resources That Both Promote Scientific Investigation and Protect Human Subjects

    György Marko-Varga, Baker, M. S., Boja, E. S., Rodriguez, H. & Fehniger, T., 2014, I : Journal of Proteome Research. 13, 12, s. 5319-5324

    Forskningsoutput: TidskriftsbidragDebate/Note/Editorial

  23. Standardization and Utilization of Biobank Resources in Clinical Protein Sciene with Examples of Emerging Applications

    György Marko-Varga, Végvári, Á., Charlotte Welinder, Henrik Lindberg, Melinda Rezeli, Edula, G., Svensson, K., Mattias Belting, Thomas Laurell & Fehniger, T., 2012, I : Journal of Proteome Research. 11, 11, s. 5124-5134

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  24. Proteomics and disease - The challenges for technology and discovery

    György Marko-Varga & Fehniger, TE., 2004, I : Journal of Proteome Research. 3, 2, s. 167-178

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  25. Linking proteins to disease processes

    György Marko-Varga & Fehniger, T. E., 2004, I : Journal of Proteome Research. 3, 2, s. 155-155

    Forskningsoutput: TidskriftsbidragDebate/Note/Editorial

  26. Discovery of Biomarker Candidates within Disease by Protein Profiling: Principles and Concepts.

    György Marko-Varga, Lindberg, H., Claes-Göran Löfdahl, Jönsson, P., Hansson, L., Dahlbäck, M., Lindquist, E., Johansson, L., Foster, M. & Fehniger, T., 2005, I : Journal of Proteome Research. 4, 4, s. 1200-1212

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  27. The Immune System and the Proteome

    György Marko-Varga & LaBaer, J., 2017 jan 6, I : Journal of Proteome Research. 16, 1, s. 1 1 s.

    Forskningsoutput: TidskriftsbidragDebate/Note/Editorial

  28. Assessment of Peptide Chemical Modifications on the Development of an Accurate and Precise Multiplex Selected Reaction Monitoring Assay for Apolipoprotein E Isoforms

    Martinez-Morillo, E., Nielsen, H., Batruch, I., Drabovich, A. P., Begcevic, I., Lopez, M. F., Lennart Minthon, Bu, G., Mattsson, N., Portelius, E., Oskar Hansson & Diamandis, E. P., 2014, I : Journal of Proteome Research. 13, 2, s. 1077-1087

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  29. Targeted Proteomic Analyses of Nasal Lavage Fluid in Persulfate-Challenged Hairdressers with Bleaching Powder-Associated Rhinitis

    Mörtstedt, H., Neserin Ali, Monica Kåredal, Jacobsson, H., Emelie Rietz, Diab, K., Jörn Nielsen, Jönsson, B. A. & Christian Lindh, 2015, I : Journal of Proteome Research. 14, 2, s. 860-873

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  30. Screening Method Using Selected Reaction Monitoring for Targeted Proteomics Studies of Nasal Lavage Fluid.

    Mörtstedt, H., Monica Kåredal, Jönsson, B. A. & Christian Lindh, 2012, I : Journal of Proteome Research.

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  31. Use of ENCODE Resources to Characterize Novel Proteoforms and Missing Proteins in the Human Proteome

    Nilsson, C., Mostovenko, E., Lichti, C., Ruggles, K., Fenyö, D., Rosenbloom, K., Hancock, W., Paik, Y-K., Omenn, G., LaBaer, J., Kroes, R., Uhlén, M., Hober, S., Végvári, Á., Andrén, P., Sulman, E., Lang, F., Fuentes, M., Carlsohn, E., Emmett, M. & 4 andra, Moskal, J., Berven, F., Fehniger, T. & György Marko-Varga, 2015, I : Journal of Proteome Research. 14, 2, s. 603-608

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  32. Chromosome 19 Annotations with Disease Speciation - A First Report from the Global Research Consortium

    Nilsson, C. L., Berven, F., Selheim, F., Liu, H., Moskal, J. F., Kroes, R. A., Sulman, E. P., Conrad, C. A., Lang, F. F., Andrén, P. E., Nilsson, A., Carlsohn, E., Lilja, H., Malm, J., Fenyö, D., Subramaniyam, D., Wang, X., Gonzales-Gonzales, M., Dasilva, N., Diez, P. & 11 andra, Fuentes, M., Végvári, Á., Sjödin, K., Charlotte Welinder, Thomas Laurell, Fehniger, T., Henrik Lindberg, Melinda Rezeli, Edula, G., Hober, S. & György Marko-Varga, 2013, I : Journal of Proteome Research. 12, 1, s. 135-150

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  33. Quantitative phosphoproteomic analysis of the STAT3/IL-6/HIF1alpha signaling network: an initial study in GSC11 glioblastoma stem cells

    Carol L Nilsson, Dillon, R., Devakumar, A., Shi, S. D-H., Greig, M. J., Rogers, J. C., Krastins, B., Rosenblatt, M., Kilmer, G., Major, M., Kaboord, B. J., Sarracino, D., Rezai, T., Prakash, A., Lopez, M., Ji, Y., Priebe, W., Lang, F., Colman, H. & Conrad, C. A., 2010 jan, I : Journal of Proteome Research. 9, 1, s. 430-443 14 s.

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  34. The Lecticans of Mammalian Brain Perineural Net Are O-Mannosylated

    Pacharra, S., Hanisch, F-G., Muehlenhoff, M., Faissner, A., Uwe Rauch & Breloy, I., 2013, I : Journal of Proteome Research. 12, 4, s. 1764-1771

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  35. Standard Guidelines for the Chromosome-Centric Human Proteome Project

    Paik, Y-K., Omenn, G. S., Uhlen, M., Hanash, S., Marko-Varga, G., Aebersold, R., Bairoch, A., Yamamoto, T., Legrain, P., Lee, H-J., Na, K., Jeong, S-K., He, F., Binz, P-A., Nishimura, T., Keown, P., Baker, M. S., Yoo, J. S., Garin, J., Archakov, A. & 3 andra, Bergeron, J., Salekdeh, G. H. & Hancock, W. S., 2012, I : Journal of Proteome Research. 11, 4, s. 2005-2013

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  36. Genome-wide Proteomics, Chromosome-centric Human Proteome Project (C-HPP), Part II

    Paik, Y-K., Omenn, G. S., Thongboonkerd, V., György Marko-Varga & Hancock, W. S., 2014, I : Journal of Proteome Research. 13, 1, s. 1-4

    Forskningsoutput: TidskriftsbidragDebate/Note/Editorial

  37. Protein Expression Profiling of Formalin-Fixed Paraffin-Embedded Tissue Using Recombinant Antibody Microarrays

    Pauly, F., Dexlin Mellby, L., Sara Ek, Mats Ohlin, Olsson, N., Karin Jirström, Michael Dictor, Schoenmakers, S., Carl Borrebaeck & Christer Wingren, 2013, I : Journal of Proteome Research. 12, 12, s. 5943-5953

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  38. Quantitative Proteomics Profiling of Primary Lung Adenocarcinoma Tumors Reveals Functional Perturbations in Tumor Metabolism

    Pernemalm, M., De Petris, L., Branca, R. M., Forshed, J., Kanter, L., Soria, J-C., Girard, P., Validire, P., Pawitan, Y., van den Oord, J., Lazar, V., Sven Påhlman, Lewensohn, R. & Lehtio, J., 2013, I : Journal of Proteome Research. 12, 9, s. 3934-3943

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  39. Identification of a Novel Autoimmune Peptide Epitope of Prostein in Prostate Cancer

    Pin, E., Henjes, F., Hong, M. G., Wiklund, F., Magnusson, P., Anders Bjartell, Uhlén, M., Nilsson, P. & Schwenk, J. M., 2017 jan 6, I : Journal of Proteome Research. 16, 1, s. 204-216 13 s.

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  40. Proteomic investigation of glioblastoma cell lines treated with wild-type p53 and cytotoxic chemotherapy demonstrates an association between galectin-1 and p53 expression

    Puchades, M., Carol L Nilsson, Emmett, M. R., Aldape, K. D., Ji, Y., Lang, F., Liu, T-J. & Conrad, C. A., 2007 feb, I : Journal of Proteome Research. 6, 2, s. 869-75 7 s.

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  41. Quantitative Label-Free Phosphoproteomics of Six Different Life Stages of the Late Blight Pathogen Phytophthora infestans Reveals Abundant Phosphorylation of Members of the CRN Effector Family

    Resjo, S., Ali, A., Meijer, H. J. G., Seidl, M. F., Snel, B., Sandin, M., Fredrik Levander, Govers, F. & Andreasson, E., 2014, I : Journal of Proteome Research. 13, 4, s. 1848-1859

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  42. Quantitation of 87 Proteins by nLC-MRM/MS in Human Plasma: Workflow for Large-Scale Analysis of Biobank Samples

    Melinda Rezeli, Sjödin, K., Henrik Lindberg, Olof Gidlöf, Lindahl, B., Jernberg, T., Spaak, J., David Erlinge & György Marko-Varga, 2017 sep 1, I : Journal of Proteome Research. 16, 9, s. 3242-3254 13 s.

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  43. Expression of a Core 3 Disialyl-Le(x) Hexasaccharide in Human Colorectal Cancers: A Potential Marker of Malignant Transformation in Colon.

    Robbe-Masselot, C., Herrmann, A., Maes, E., Ingemar Carlstedt, Michalski, J-C. & Capon, C., 2009, I : Journal of Proteome Research.

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  44. Mining the Proteome Associated with Rheumatic and Autoimmune Diseases

    Ruiz-Romero, C., Lam, M. P. Y., Nilsson, P., Patrik Önnerfjord, Utz, P. J., Van Eyk, J. E., Venkatraman, V., Fert-Bober, J., Watt, F. E. & Blanco, F. J., 2019 okt 10, I : Journal of Proteome Research.

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  45. Determination of Phosphorylation Sites in the DivIVA Cytoskeletal Protein of Streptomyces coelicolor by Targeted LC-MS/MS

    Saalbach, G., Hempel, A. M., Vigouroux, M., Klas Flärdh, Buttner, M. J. & Naldrett, M. J., 2013, I : Journal of Proteome Research. 12, 9, s. 4187-4192

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  46. AFFIRM – a multiplexed immunoaffinity platform that combines recombinant antibody fragments and LC-SRM analysis

    Säll, A., Carlsson, F., Olsson, N., Christer Wingren, Mats Ohlin, Persson, H. & Waldemarson, S., 2014, I : Journal of Proteome Research. 13, 12, s. 5837-5847

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  47. Development of Phage-Based Antibody Fragment Reagents for Affinity Enrichment of Bacterial Immunoglobulin G Binding Proteins.

    Säll, A., Sjöholm, K., Waldemarson, S., Lotta Happonen, Christofer Karlsson, Persson, H. & Johan Malmström, 2015, I : Journal of Proteome Research. 14, 11, s. 4704-4713

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  48. 14-3-3 expression in denervated hippocampus after entorhinal cortex lesion assessed by culture-derived isotope tags in quantitative proteomics

    Sihlbom, C., Wilhelmsson, U., Li, L., Carol L Nilsson & Pekny, M., 2007 sep, I : Journal of Proteome Research. 6, 9, s. 3491-3500 10 s.

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift