Molecular and Cellular Proteomics, 1535-9484

Tidskrift

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  1. 2019
  2. A targeted mass spectrometry strategy for developing proteomic biomarkers: a case study of epithelial ovarian cancer

    Huttenhain, R., Choi, M., Laura Martin de la Fuente, Oehl, K., Chang, C-Y., Zimmermann, A-K., Malander, S., Hakan Olsson, Surinova, S., Clough, T., Heinzelmann-Schwarz, V., Wild, P. J., Dinulescu, D., Emma Niméus, Vitek, O. & Aebersold, R., 2019, I : Molecular and Cellular Proteomics. 18, 9, s. 1836-1850

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  3. 2018
  4. Comparative Secretome Analyses of Primary Murine White and Brown Adipocytes Reveal Novel Adipokines

    Ali Khan, A., Jenny Hansson, Weber, P., Foehr, S., Krijgsveld, J., Herzig, S. & Scheideler, M., 2018 dec, I : Molecular and Cellular Proteomics. 17, 12, s. 2358-2370 13 s.

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  5. Streptococcus pyogenes Infection and the Human Proteome with a Special Focus on the Immunoglobulin G-cleaving Enzyme IdeS

    Christofer A.Q. Karlsson, Järnum, S., Winstedt, L., Kjellman, C., Lars Björck, Adam Linder & Johan A. Malmström, 2018 jun 1, I : Molecular and Cellular Proteomics. 17, 6, s. 1097-1111

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  6. Development of large-scale cross-linking mass spectrometry

    Barysz, H. M. & Johan Malmstroem, 2018, I : Molecular and Cellular Proteomics. 17, 6, s. 1055-1066

    Forskningsoutput: TidskriftsbidragÖversiktsartikel

  7. 2017
  8. Proteomic analysis of phytophthora infestans reveals the importance of cell wall proteins in pathogenicity

    Resjö, S., Brus, M., Ashfaq Ali, Meijer, H. J. G., Sandin, M., Govers, F., Fredrik Levander, Grenville-Briggs, L. J. & Andreasson, E., 2017 nov 1, I : Molecular and Cellular Proteomics. 16, 11, s. 1958-1971 14 s.

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  9. Targeted proteomics and absolute protein quantification for the construction of a stoichiometric host-pathogen surface density model

    Sjöholm, K., Kilsgård, O., Teleman, J., Lotta Happonen, Lars Malmström & Johan Malmström, 2017 apr 1, I : Molecular and Cellular Proteomics. 16, 4, s. S29-S41

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  10. 2015
  11. Quantitative proteomics reveals protein-protein interactions with fibroblast growth factor 12 as a component of the voltage-gated sodium channel 1.2 (nav1.2) macromolecular complex in Mammalian brain

    Wildburger, N. C., Ali, S. R., Hsu, W-C. J., Shavkunov, A. S., Nenov, M. N., Lichti, C. F., LeDuc, R. D., Mostovenko, E., Panova-Elektronova, N. I., Emmett, M. R., Carol L Nilsson & Laezza, F., 2015 maj, I : Molecular and Cellular Proteomics. 14, 5, s. 1288-1300 13 s.

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  12. 2014
  13. Ferritin heavy chain in triple negative breast cancer: a favorable prognostic marker that relates to a cluster of differentiation 8 positive (CD8+) effector T-cell response

    Liu, N. Q., Tommaso De Marchi, Timmermans, A. M., Beekhof, R., Trapman-Jansen, A. M. A. C., Foekens, R., Look, M. P., van Deurzen, C. H. M., Span, P. N., Sweep, F. C. G. J., Brask, J. B., Timmermans-Wielenga, V., Debets, R., Martens, J. W. M., Foekens, J. A. & Umar, A., 2014 jul, I : Molecular and Cellular Proteomics. 13, 7, s. 1814-27 14 s.

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  14. Inhibition of Circulating Dipeptidyl Peptidase 4 Activity in Patients with Metastatic Prostate Cancer

    Nazarian, A., Lawlor, K., Yi, S. S., Philip, J., Ghosh, M., Yaneva, M., Villanueva, J., Saghatelian, A., Assel, M., Vickers, A. J., Eastham, J. A., Scher, H. I., Carver, B. S., Hans Lilja & Tempst, P., 2014, I : Molecular & Cellular Proteomics. 13, 11, s. 3082-3096

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  15. Numerical compression schemes for proteomics mass spectrometry data.

    Teleman, J., Dowsey, A. W., Gonzalez-Galarza, F. F., Perkins, S., Pratt, B., Rost, H., Malmstrom, L., Johan Malmström, Jones, A. R., Deutsch, E. W. & Levander, F., 2014, I : Molecular & Cellular Proteomics. 13, 6, s. 1537-1542

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  16. Quantitative proteomic analysis reveals metabolic alterations, calcium dysregulation and increased expression of extracellular matrix proteins in laminin α2 chain-deficient muscle.

    Menezes de Oliveira, B., Matsumura, C., Fontes Oliveira, C., Kinga Gawlik, Acosta, H., Wernhoff, P. & Madeleine Durbeej-Hjalt, 2014, I : Molecular & Cellular Proteomics. 13, 11, s. 3001-3013

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  17. 2013
  18. An adaptive alignment algorithm for quality-controlled label-free LC-MS.

    Sandin, M., Ali, A., Hansson, K., Månsson, O., Andreasson, E., Resjö, S. & Fredrik Levander, 2013, I : Molecular & Cellular Proteomics. 12, 5, s. 1407-1420

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  19. Grading breast cancer tissues using molecular portraits.

    Olsson, N., Skoog, P., Peter James, Hansson, K. M., Waldemarson, S., Per Malmström, Mårten Fernö, Lisa Rydén, Christer Wingren & Carl Borrebaeck, 2013, I : Molecular & Cellular Proteomics. 12, 12, s. 3612-3623

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  20. Network-based Analysis of Genome Wide Association Data Provides Novel Candidate Genes for Lipid and Lipoprotein Traits

    Sharma, A., Gulbahce, N., Pevzner, S. J., Menche, J., Ladenvall, C., Folkersen, L., Eriksson, P., Marju Orho-Melander & Barabasi, A-L., 2013, I : Molecular & Cellular Proteomics. 12, 11, s. 3398-3408

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  21. 2012
  22. Proteomic cornerstones of hematopoietic stem cell differentiation: distinct signatures of multipotent progenitors and myeloid committed cells

    Klimmeck, D., Jenny Hansson, Raffel, S., Vakhrushev, S. Y., Trumpp, A. & Krijgsveld, J., 2012 aug, I : Molecular & Cellular Proteomics. 11, 8, s. 286-302 17 s.

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  23. TraML: a standard format for exchange of selected reaction monitoring transition lists

    Deutsch, E. W., Chambers, M., Neumann, S., Fredrik Levander, Binz, P-A., Shofstahl, J., Campbell, D. S., Mendoza, L., Ovelleiro, D., Helsens, K., Martens, L., Aebersold, R., Moritz, R. L. & Brusniak, M-Y., 2012, I : Molecular & Cellular Proteomics. 11, 4, s. R111.015040

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  24. 2011
  25. A high-confidence human plasma proteome reference set with estimated concentrations in PeptideAtlas

    Farrah, T., Deutsch, E. W., Omenn, G. S., Campbell, D. S., Sun, Z., Bletz, J. A., Mallick, P., Katz, J. E., Johan Malmström, Ossola, R., Watts, J. D., Lin, B., Zhang, H., Moritz, R. L. & Aebersold, R., 2011 sep, I : Molecular & Cellular Proteomics. 10, 9, s. M110.006353

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  26. Time-resolved quantitative proteome analysis of in vivo intestinal development

    Jenny Hansson, Panchaud, A., Favre, L., Bosco, N., Mansourian, R., Benyacoub, J., Blum, S., Jensen, O. N. & Kussmann, M., 2011 mar, I : Molecular & Cellular Proteomics. 10, 3, s. M110.005231

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  27. Characterization of human myotubes from type 2 diabetic and non-diabetic subjects using complementary quantitative mass spectrometric methods.

    Thingholm, T., Bak, S., Beck-Nielsen, H., Jensen, O. N. & Gaster, M., 2011, I : Molecular & Cellular Proteomics. 10, 9

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  28. Impact of temperature dependent sampling procedures in proteomics and peptidomics – A characterization of the liver and pancreas post mortem degradome

    Schultz, B., Sköld, K., Kultima, K., Celine Fernandez, Waldemarson, S., Savitski, M., Svensson, M., Borén, M., Stella, R., Andrén, P., Zubarev, R. & Peter James, 2011, I : Molecular & Cellular Proteomics. 10, 3

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  29. mzML - a community standard for mass Spectrometry data

    Martens, L., Chambers, M., Sturm, M., Kessner, D., Fredrik Levander & Shofstahl, J., 2011, I : Molecular & Cellular Proteomics. 10, 1, s. R110.000133.1-R110.000133.2

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  30. Proteomic analysis and discovery using affinity proteomics and mass spectrometry.

    Olsson, N., Christer Wingren, Mattsson, M., Peter James, O'Connell, D., Nilsson, F., Cahill, D. J. & Carl Borrebaeck, 2011, I : Molecular & Cellular Proteomics. 10

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  31. Serum protein profiling of systemic lupus erythematosus and systemic sclerosis using recombinant antibody microarrays.

    Carlsson, A., Dirk Wuttge, Ingvarsson, J., Anders Bengtsson, Sturfelt, G., Borrebaeck, C. & Wingren, C., 2011, I : Molecular & Cellular Proteomics. 10

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  32. The Human Proteome Project: Current State and Future Direction

    Legrain, P., Aebersold, R., Archakov, A., Bairoch, A., Bala, K., Beretta, L., Bergeron, J., Borchers, C. H., Corthals, G. L., Costello, C. E., Deutsch, E. W., Domon, B., Hancock, W., He, F., Hochstrasser, D., Marko-Varga, G., Salekdeh, G. H., Sechi, S., Snyder, M., Srivastava, S. & 5 andraUhlen, M., Wu, C. H., Yamamoto, T., Paik, Y-K. & Omenn, G. S., 2011, I : Molecular & Cellular Proteomics. 10, 7

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  33. 2010
  34. A community standard format for the representation of protein affinity reagents

    Gloriam, D. E., Orchard, S., Bertinetti, D., Bjorling, E., Bongcam-Rudloff, E., Borrebaeck, C., Bourbeillon, J., Bradbury, A. R. M., de Daruvar, A., Duebel, S., Frank, R., Gibson, T. J., Gold, L., Haslam, N., Herberg, F. W., Hiltke, T., Hoheisel, J. D., Kerrien, S., Koegl, M., Konthur, Z. & 16 andraKorn, B., Landegren, U., Montecchi-Palazzi, L., Palcy, S., Rodriguez, H., Schweinsberg, S., Sievert, V., Stoevesandt, O., Taussig, M. J., Ueffing, M., Uhlen, M., van der Maarel, S., Christer Wingren, Woollard, P., Sherman, D. J. & Hermjakob, H., 2010, I : Molecular & Cellular Proteomics. 9, 1, s. 1-10

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  35. Integrated protein array screening and high throughput validation of 70 novel neural calmodulin binding proteins

    O'Connell, D., Bauer, M., O'Brien, J., Johnson, W. M., Divizio, C. A., O'Kane, S. L., Berggård, T., Merino, A., Akerfeldt, K., Sara Linse & Cahill, D. J., 2010, I : Molecular & Cellular Proteomics. 9, 6, s. 1118-1132

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  36. Proteomics of Plasma Membranes from Poplar Trees Reveals Tissue Distribution of Transporters, Receptors, and Proteins in Cell Wall Formation

    Nilsson, R., Katja Bernfur, Gustavsson, N., Bygdell, J., Wingsle, G. & Christer Larsson, 2010, I : Molecular & Cellular Proteomics. 9, 2, s. 368-387

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  37. Toward Next Generation Plasma Profiling via Heat-induced Epitope Retrieval and Array-based Assays

    Schwenk, J. M., Igel, U., Neiman, M., Langen, H., Charlotte Becker, Anders Bjartell, Ponten, F., Wiklund, F., Gronberg, H., Nilsson, P. & Uhlen, M., 2010, I : Molecular & Cellular Proteomics. 9, 11, s. 2497-2507

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  38. 2009
  39. Proteome Survey Using Affinity Proteomics and Mass Spectrometry

    Olsson, N., Christer Wingren, Mattsson, M., Peter James, Nilsson, F. & Carl Borrebaeck, 2009, I : Molecular & Cellular Proteomics. 8, 8 Suppl. 1, s. S21-S21

    Forskningsoutput: TidskriftsbidragPublicerat konferensabstract

  40. 2008
  41. ANIBAL, stable isotope-based quantitative proteomics by aniline and benzoic acid labeling of amino and carboxylic groups

    Panchaud, A., Jenny Hansson, Affolter, M., Bel Rhlid, R., Piu, S., Moreillon, P. & Kussmann, M., 2008 apr, I : Molecular & Cellular Proteomics. 7, 4, s. 800-12 13 s.

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  42. 15-Prostaglandin Dehydrogenase Expression Alone or in Combination with ACSM1 Defines a Subgroup of the Apocrine Molecular Subtype of Breast Carcinoma

    Celis, J. E., Gromov, P., Cabezon, T., Moreira, J. M. A., Friis, E., Karin Jirström, Llombart-Bosch, A., Timmermans-Wielenga, V., Rank, F. & Gromova, I., 2008, I : Molecular & Cellular Proteomics. 7, 10, s. 1795-1809

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  43. Identification of paracrine neuroprotective candidate proteins by a functional assay-driven proteomics approach

    Hauck, S. M., Gloeckner, C. J., Harley, M. E., Schoeffmann, S., Boldt, K., Per Ekström & Ueffing, M., 2008, I : Molecular & Cellular Proteomics. 7, 7, s. 1349-1361

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  44. Targeted quantitative analysis of Streptococcus pyogenes virulence factors by multiple reaction monitoring

    Lange, V., Johan A. Malmstroem, Didion, J., King, N. L., Johansson, B., Schaefer, J., Rameseder, J., Wong, C-H., Deutsch, E. W., Brusniak, M-Y., Buehlmann, P., Lars Björck, Domon, B. & Aebersold, R., 2008, I : Molecular & Cellular Proteomics. 7, 8, s. 1489-1500

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  45. 2007
  46. Antibody microarray-based serum protein profiling of systemic lupus erythematosus and systemic sclerosis

    Carlsson, A., Dirk Wuttge, Ingvarsson, J., Sturfelt, G., Carl Borrebaeck & Christer Wingren, 2007, I : Molecular & Cellular Proteomics. October, s. S310

    Forskningsoutput: TidskriftsbidragPublicerat konferensabstract

  47. Design of self-addressabl antibody microarrays based on recombinant scFv antibodies microarray adapted by molecular design

    Christer Wingren, Vallkil, J., Larsson, C., Nordström, M., Lööf, K., Höök, F. & Carl Borrebaeck, 2007, I : Molecular & Cellular Proteomics. October, s. S311

    Forskningsoutput: TidskriftsbidragPublicerat konferensabstract

  48. Recombinant antibdy microarray based oncoproteomics detects cancer and defines a predictor of survival for pancreatic carcinoma

    Ingvarsson, J., Christer Wingren, Carlsson, A., Ellmark, P., Wahren, B., Engström, G., Harmenberg, U., Krogh, M., Peterson, C. & Carl Borrebaeck, 2007, I : Molecular & Cellular Proteomics. s. S311

    Forskningsoutput: TidskriftsbidragPublicerat konferensabstract

  49. Serum protein profiling of metastatic breast cancer

    Carlsson, A., Christer Wingren, Ingvarsson, J., Ellmark, P., Bo Baldetorp, Mårten Fernö, Håkan Olsson & Carl Borrebaeck, 2007, I : Molecular & Cellular Proteomics. October, s. S311

    Forskningsoutput: TidskriftsbidragPublicerat konferensabstract

  50. 2006
  51. Design of recombinant antibodies for high-throughput proteomics

    Christer Wingren, Ingvarsson, J., Dexlin Mellby, L., Carlsson, A., Vallkil, J. & Carl Borrebaeck, 2006, I : Molecular & Cellular Proteomics. 5, s. S73

    Forskningsoutput: TidskriftsbidragPublicerat konferensabstract

  52. Differential modification of phosducin protein in degenerating rd1 ret is associated with constitutively active CaMKII in rod outer segments.

    Hauck, S. M., Per Ekström, Ahuja Jensen, P., Suppman, S., Paquet-Durand, F., van Veen, T. & Ueffing, M., 2006, I : Molecular & Cellular Proteomics. 5, 2, s. 324-336

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  53. From gene expression analysis to tissue microarrays - A rational approach to identify therapeutic and diagnostic targets in lymphoid malignancies

    Sara Ek, Andreasson, U., Hober, S., Kampf, C., Ponten, F., Uhlen, M., Merz, H. & Carl Borrebaeck, 2006, I : Molecular & Cellular Proteomics. 5, 6, s. 1072-1081

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  54. High-throughput membrane proteomics using recombinant antibody microarrays

    Dexlin Mellby, L., Ingvarsson, J., Karlsson, J., Ellmark, P., Frendeus, B., Carl Borrebaeck & Christer Wingren, 2006, I : Molecular & Cellular Proteomics. 5, 10, s. S70

    Forskningsoutput: TidskriftsbidragPublicerat konferensabstract

  55. Identification of protein expression signatures associated with Helicobacter pylori infection and gastric adenocarcinoma using recombinant antibody microarrays

    Ellmark, P., Ingvarsson, J., Carlsson, A., Lundin, B. S., Christer Wingren & Carl Borrebaeck, 2006, I : Molecular & Cellular Proteomics. 5, 9, s. 1638-1646

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  56. 2005
  57. A dataset of human cornea proteins identified by Peptide mass fingerprinting and tandem mass spectrometry

    Karring, H., Thogersen, I. B., Klintworth, G. K., Moller-Pedersen, T. & Enghild, J. J., 2005, I : Molecular & Cellular Proteomics. 4, 9, s. 1406-1408

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  58. Antibody microarrays: Technology and analysis of serum proteomes from cancer patients

    Christer Wingren, Ingvarsson, J., Carlsson, A. & Carl Borrebaeck, 2005, I : Molecular & Cellular Proteomics. 4, Supplement 1, s. S338

    Forskningsoutput: TidskriftsbidragPublicerat konferensabstract

  59. 2004
  60. Transforming growth factor-beta 1 specifically induce proteins involved in the myofibroblast contractile apparatus

    Johan Malmström, Henrik Lindberg, Lindberg, C., Charlotte Bratt, Elisabet Wieslander, Delander, E-L., Särnstrand, B., Burns, J. S., Mose-Larsen, P., Fey, S. & György Marko-Varga, 2004 maj, I : Molecular & Cellular Proteomics. 3, 5, s. 466-477 12 s.

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift

  61. Proteomic analysis of the soluble fraction from human corneal fibroblasts with reference to ocular transparency

    Karring, H., Thogersen, I. B., Klintworth, G. K., Enghild, J. J. & Moller-Pedersen, T., 2004, I : Molecular & Cellular Proteomics. 3, 7, s. 660-674

    Forskningsoutput: TidskriftsbidragArtikel i vetenskaplig tidskrift