Molecular and Cellular Proteomics, 1535-9484
Tidskrift
- 2019
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A targeted mass spectrometry strategy for developing proteomic biomarkers: a case study of epithelial ovarian cancer
Ruth Huttenhain, Meena Choi, Laura Martin de la Fuente, Kathrin Oehl, Ching-Yun Chang, Anne-Kathrin Zimmermann, Susanne Malander, Hakan Olsson, Silvia Surinova, Timothy Clough, Viola Heinzelmann-Schwarz, Peter J Wild, Daniela Dinulescu, Emma Niméus, Olga Vitek & Ruedi Aebersold, 2019, I : Molecular and Cellular Proteomics. 18, 9, s. 1836-1850Forskningsoutput: Tidskriftsbidrag › Artikel i vetenskaplig tidskrift
- 2018
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Comparative Secretome Analyses of Primary Murine White and Brown Adipocytes Reveal Novel Adipokines
Asrar Ali Khan, Jenny Hansson, Peter Weber, Sophia Foehr, Jeroen Krijgsveld, Stephan Herzig & Marcel Scheideler, 2018 dec, I : Molecular and Cellular Proteomics. 17, 12, s. 2358-2370 13 s.Forskningsoutput: Tidskriftsbidrag › Artikel i vetenskaplig tidskrift
Streptococcus pyogenes Infection and the Human Proteome with a Special Focus on the Immunoglobulin G-cleaving Enzyme IdeS
Christofer A.Q. Karlsson, Sofia Järnum, Lena Winstedt, Christian Kjellman, Lars Björck, Adam Linder & Johan A. Malmström, 2018 jun 1, I : Molecular and Cellular Proteomics. 17, 6, s. 1097-1111Forskningsoutput: Tidskriftsbidrag › Artikel i vetenskaplig tidskrift
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Development of large-scale cross-linking mass spectrometry
Helena Maria Barysz & Johan Malmstroem, 2018, I : Molecular and Cellular Proteomics. 17, 6, s. 1055-1066Forskningsoutput: Tidskriftsbidrag › Översiktsartikel
- 2017
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Proteomic analysis of phytophthora infestans reveals the importance of cell wall proteins in pathogenicity
Svante Resjö, Maja Brus, Ashfaq Ali, Harold J. G. Meijer, Marianne Sandin, Francine Govers, Fredrik Levander, Laura J. Grenville-Briggs & Erik Andreasson, 2017 nov 1, I : Molecular and Cellular Proteomics. 16, 11, s. 1958-1971 14 s.Forskningsoutput: Tidskriftsbidrag › Artikel i vetenskaplig tidskrift
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Targeted proteomics and absolute protein quantification for the construction of a stoichiometric host-pathogen surface density model
Kristoffer Sjöholm, Ola Kilsgård, Johan Teleman, Lotta Happonen, Lars Malmström & Johan Malmström, 2017 apr 1, I : Molecular and Cellular Proteomics. 16, 4, s. S29-S41Forskningsoutput: Tidskriftsbidrag › Artikel i vetenskaplig tidskrift
- 2015
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Quantitative proteomics reveals protein-protein interactions with fibroblast growth factor 12 as a component of the voltage-gated sodium channel 1.2 (nav1.2) macromolecular complex in Mammalian brain
Norelle C Wildburger, Syed R Ali, Wei-Chun J Hsu, Alexander S Shavkunov, Miroslav N Nenov, Cheryl F Lichti, Richard D LeDuc, Ekaterina Mostovenko, Neli I Panova-Elektronova, Mark R Emmett, Carol L Nilsson & Fernanda Laezza, 2015 maj, I : Molecular and Cellular Proteomics. 14, 5, s. 1288-1300 13 s.Forskningsoutput: Tidskriftsbidrag › Artikel i vetenskaplig tidskrift
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Proteomics-based metabolic modeling reveals that fatty acid oxidation (FAO) controls endothelial cell (EC) permeability
Francesca Patella, Zachary T. Schug, Erez Persi, Lisa J. Neilson, Zahra Erami, Daniele Avanzato, Federica Maione, Juan R. Hernandez-Fernaud, Gillian Mackay, Liang Zheng, Steven Reid, Christian Frezza, Enrico Giraudo, Alessandra Fiorio Pla, Kurt Anderson, Eytan Ruppin, Eyal Gottlieb & Sara Zanivan, 2015 mar 1, I : Molecular and Cellular Proteomics. 14, 3, s. 621-634Forskningsoutput: Tidskriftsbidrag › Artikel i vetenskaplig tidskrift
- 2014
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Ferritin heavy chain in triple negative breast cancer: a favorable prognostic marker that relates to a cluster of differentiation 8 positive (CD8+) effector T-cell response
Ning Qing Liu, Tommaso De Marchi, Annemieke M Timmermans, Robin Beekhof, Anita M A C Trapman-Jansen, Renée Foekens, Maxime P. Look, Carolien H. M. van Deurzen, Paul N. Span, Fred C G J Sweep, Julie Benedicte Brask, Vera Timmermans-Wielenga, Reno Debets, John W. M. Martens, John A. Foekens & Arzu Umar, 2014 jul, I : Molecular and Cellular Proteomics. 13, 7, s. 1814-27 14 s.Forskningsoutput: Tidskriftsbidrag › Artikel i vetenskaplig tidskrift
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Inhibition of Circulating Dipeptidyl Peptidase 4 Activity in Patients with Metastatic Prostate Cancer
Arpi Nazarian, Kevin Lawlor, San San Yi, John Philip, Mousumi Ghosh, Mariana Yaneva, Josep Villanueva, Alan Saghatelian, Melissa Assel, Andrew J. Vickers, James A. Eastham, Howard I. Scher, Brett S. Carver, Hans Lilja & Paul Tempst, 2014, I : Molecular & Cellular Proteomics. 13, 11, s. 3082-3096Forskningsoutput: Tidskriftsbidrag › Artikel i vetenskaplig tidskrift
Numerical compression schemes for proteomics mass spectrometry data.
Johan Teleman, Andrew W Dowsey, Faviel F Gonzalez-Galarza, Simon Perkins, Brian Pratt, Hannes Rost, Lars Malmstrom, Johan Malmström, Andrew R Jones, Eric W Deutsch & Fredrik Levander, 2014, I : Molecular & Cellular Proteomics. 13, 6, s. 1537-1542Forskningsoutput: Tidskriftsbidrag › Artikel i vetenskaplig tidskrift
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Quantitative proteomic analysis reveals metabolic alterations, calcium dysregulation and increased expression of extracellular matrix proteins in laminin α2 chain-deficient muscle.
Bruno Menezes de Oliveira, Cintia Matsumura, Cibely Fontes Oliveira, Kinga Gawlik, Helena Acosta, Patrik Wernhoff & Madeleine Durbeej-Hjalt, 2014, I : Molecular & Cellular Proteomics. 13, 11, s. 3001-3013Forskningsoutput: Tidskriftsbidrag › Artikel i vetenskaplig tidskrift
- 2013
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An adaptive alignment algorithm for quality-controlled label-free LC-MS.
Marianne Sandin, Ashfaq Ali, Karin Hansson, Olle Månsson, Erik Andreasson, Svante Resjö & Fredrik Levander, 2013, I : Molecular & Cellular Proteomics. 12, 5, s. 1407-1420Forskningsoutput: Tidskriftsbidrag › Artikel i vetenskaplig tidskrift
Grading breast cancer tissues using molecular portraits.
Niclas Olsson, Petter Skoog, Peter James, Karin M Hansson, Sofia Waldemarson, Per Malmström, Mårten Fernö, Lisa Rydén, Christer Wingren & Carl Borrebaeck, 2013, I : Molecular & Cellular Proteomics. 12, 12, s. 3612-3623Forskningsoutput: Tidskriftsbidrag › Artikel i vetenskaplig tidskrift
Identification of a Novel Proteoform of Prostate Specific Antigen (SNP-L132I) in Clinical Samples by Multiple Reaction Monitoring.
Ákos Végvári, Karin Sjödin, Melinda Rezeli, Johan Malm, Hans Lilja, Thomas Laurell & György Marko-Varga, 2013, I : Molecular & Cellular Proteomics. 12, 10, s. 2761-2773Forskningsoutput: Tidskriftsbidrag › Artikel i vetenskaplig tidskrift
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Network-based Analysis of Genome Wide Association Data Provides Novel Candidate Genes for Lipid and Lipoprotein Traits
Amitabh Sharma, Natali Gulbahce, Samuel J. Pevzner, Joerg Menche, Claes Ladenvall, Lasse Folkersen, Per Eriksson, Marju Orho-Melander & Albert-Laszlo Barabasi, 2013, I : Molecular & Cellular Proteomics. 12, 11, s. 3398-3408Forskningsoutput: Tidskriftsbidrag › Artikel i vetenskaplig tidskrift
- 2012
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Proteomic cornerstones of hematopoietic stem cell differentiation: distinct signatures of multipotent progenitors and myeloid committed cells
Daniel Klimmeck, Jenny Hansson, Simon Raffel, Sergey Y Vakhrushev, Andreas Trumpp & Jeroen Krijgsveld, 2012 aug, I : Molecular & Cellular Proteomics. 11, 8, s. 286-302 17 s.Forskningsoutput: Tidskriftsbidrag › Artikel i vetenskaplig tidskrift
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Quantitative proteomics targeting classes of motif-containing peptides using immunoaffinity-based mass spectrometry.
Niclas Olsson, Peter James, Carl Borrebaeck & Christer Wingren, 2012, I : Molecular & Cellular Proteomics. 11, 8, s. 342-354Forskningsoutput: Tidskriftsbidrag › Artikel i vetenskaplig tidskrift
TraML: a standard format for exchange of selected reaction monitoring transition lists
Eric W. Deutsch, Matthew Chambers, Steffen Neumann, Fredrik Levander, Pierre-Alain Binz, Jim Shofstahl, David S. Campbell, Luis Mendoza, David Ovelleiro, Kenny Helsens, Lennart Martens, Ruedi Aebersold, Robert L. Moritz & Mi-Youn Brusniak, 2012, I : Molecular & Cellular Proteomics. 11, 4, s. R111.015040Forskningsoutput: Tidskriftsbidrag › Artikel i vetenskaplig tidskrift
- 2011
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A high-confidence human plasma proteome reference set with estimated concentrations in PeptideAtlas
Terry Farrah, Eric W Deutsch, Gilbert S Omenn, David S Campbell, Zhi Sun, Julie A Bletz, Parag Mallick, Jonathan E Katz, Johan Malmström, Reto Ossola, Julian D Watts, Biaoyang Lin, Hui Zhang, Robert L Moritz & Ruedi Aebersold, 2011 sep, I : Molecular & Cellular Proteomics. 10, 9, s. M110.006353Forskningsoutput: Tidskriftsbidrag › Artikel i vetenskaplig tidskrift
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Time-resolved quantitative proteome analysis of in vivo intestinal development
Jenny Hansson, Alexandre Panchaud, Laurent Favre, Nabil Bosco, Robert Mansourian, Jalil Benyacoub, Stephanie Blum, Ole N Jensen & Martin Kussmann, 2011 mar, I : Molecular & Cellular Proteomics. 10, 3, s. M110.005231Forskningsoutput: Tidskriftsbidrag › Artikel i vetenskaplig tidskrift
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Characterization of human myotubes from type 2 diabetic and non-diabetic subjects using complementary quantitative mass spectrometric methods.
Tine Thingholm, Steffen Bak, Henning Beck-Nielsen, Ole N Jensen & Michael Gaster, 2011, I : Molecular & Cellular Proteomics. 10, 9Forskningsoutput: Tidskriftsbidrag › Artikel i vetenskaplig tidskrift
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Impact of temperature dependent sampling procedures in proteomics and peptidomics – A characterization of the liver and pancreas post mortem degradome
Birger Schultz, Karl Sköld, Kim Kultima, Celine Fernandez, Sofia Waldemarson, Mikhail Savitski, Marcus Svensson, Mats Borén, Roberto Stella, Per Andrén, Roman Zubarev & Peter James, 2011, I : Molecular & Cellular Proteomics. 10, 3Forskningsoutput: Tidskriftsbidrag › Artikel i vetenskaplig tidskrift
mzML - a community standard for mass Spectrometry data
Lennart Martens, Matthew Chambers, Marc Sturm, Darren Kessner, Fredrik Levander & Jim Shofstahl, 2011, I : Molecular & Cellular Proteomics. 10, 1, s. R110.000133.1-R110.000133.2Forskningsoutput: Tidskriftsbidrag › Artikel i vetenskaplig tidskrift
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Proteomic analysis and discovery using affinity proteomics and mass spectrometry.
Niclas Olsson, Christer Wingren, Mikael Mattsson, Peter James, David O'Connell, Fredrik Nilsson, Dolores J Cahill & Carl Borrebaeck, 2011, I : Molecular & Cellular Proteomics. 10Forskningsoutput: Tidskriftsbidrag › Artikel i vetenskaplig tidskrift
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Serum protein profiling of systemic lupus erythematosus and systemic sclerosis using recombinant antibody microarrays.
Anders Carlsson, Dirk Wuttge, Johan Ingvarsson, Anders Bengtsson, Gunnar Sturfelt, Carl Borrebaeck & Christer Wingren, 2011, I : Molecular & Cellular Proteomics. 10Forskningsoutput: Tidskriftsbidrag › Artikel i vetenskaplig tidskrift
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The Human Proteome Project: Current State and Future Direction
Pierre Legrain, Ruedi Aebersold, Alexander Archakov, Amos Bairoch, Kumar Bala, Laura Beretta, John Bergeron, Christoph H. Borchers, Garry L. Corthals, Catherine E. Costello, Eric W. Deutsch, Bruno Domon, William Hancock, Fuchu He, Denis Hochstrasser, György Marko-Varga, Ghasem Hosseini Salekdeh, Salvatore Sechi, Michael Snyder, Sudhir Srivastava & 5 andra, , 2011, I : Molecular & Cellular Proteomics. 10, 7Forskningsoutput: Tidskriftsbidrag › Artikel i vetenskaplig tidskrift
- 2010
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A community standard format for the representation of protein affinity reagents
David E. Gloriam, Sandra Orchard, Daniela Bertinetti, Erik Bjorling, Erik Bongcam-Rudloff, Carl Borrebaeck, Julie Bourbeillon, Andrew R. M. Bradbury, Antoine de Daruvar, Stefan Duebel, Ronald Frank, Toby J. Gibson, Larry Gold, Niall Haslam, Friedrich W. Herberg, Tara Hiltke, Joerg D. Hoheisel, Samuel Kerrien, Manfred Koegl, Zoltan Konthur & 16 andra, , 2010, I : Molecular & Cellular Proteomics. 9, 1, s. 1-10Forskningsoutput: Tidskriftsbidrag › Artikel i vetenskaplig tidskrift
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Integrated protein array screening and high throughput validation of 70 novel neural calmodulin binding proteins
David O'Connell, Mikael Bauer, John O'Brien, Winifred M Johnson, Catherine A Divizio, Sara L O'Kane, Tord Berggård, Alejandro Merino, Karin Akerfeldt, Sara Linse & Dolores J Cahill, 2010, I : Molecular & Cellular Proteomics. 9, 6, s. 1118-1132Forskningsoutput: Tidskriftsbidrag › Artikel i vetenskaplig tidskrift
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Proteomics of Plasma Membranes from Poplar Trees Reveals Tissue Distribution of Transporters, Receptors, and Proteins in Cell Wall Formation
Robert Nilsson, Katja Bernfur, Niklas Gustavsson, Joakim Bygdell, Gunnar Wingsle & Christer Larsson, 2010, I : Molecular & Cellular Proteomics. 9, 2, s. 368-387Forskningsoutput: Tidskriftsbidrag › Artikel i vetenskaplig tidskrift
Toward Next Generation Plasma Profiling via Heat-induced Epitope Retrieval and Array-based Assays
Jochen M. Schwenk, Ulrika Igel, Maja Neiman, Hanno Langen, Charlotte Becker, Anders Bjartell, Fredrik Ponten, Fredrik Wiklund, Henrik Gronberg, Peter Nilsson & Mathias Uhlen, 2010, I : Molecular & Cellular Proteomics. 9, 11, s. 2497-2507Forskningsoutput: Tidskriftsbidrag › Artikel i vetenskaplig tidskrift
- 2009
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Proteome Survey Using Affinity Proteomics and Mass Spectrometry
Niclas Olsson, Christer Wingren, M. Mattsson, Peter James, F. Nilsson & Carl Borrebaeck, 2009, I : Molecular & Cellular Proteomics. 8, 8 Suppl. 1, s. S21-S21Forskningsoutput: Tidskriftsbidrag › Publicerat konferensabstract
- 2008
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ANIBAL, stable isotope-based quantitative proteomics by aniline and benzoic acid labeling of amino and carboxylic groups
Alexandre Panchaud, Jenny Hansson, Michael Affolter, Rachid Bel Rhlid, Stéphane Piu, Philippe Moreillon & Martin Kussmann, 2008 apr, I : Molecular & Cellular Proteomics. 7, 4, s. 800-12 13 s.Forskningsoutput: Tidskriftsbidrag › Artikel i vetenskaplig tidskrift
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15-Prostaglandin Dehydrogenase Expression Alone or in Combination with ACSM1 Defines a Subgroup of the Apocrine Molecular Subtype of Breast Carcinoma
Julio E. Celis, Pavel Gromov, Teresa Cabezon, Jose M. A. Moreira, Esbern Friis, Karin Jirström, Antonio Llombart-Bosch, Vera Timmermans-Wielenga, Fritz Rank & Irina Gromova, 2008, I : Molecular & Cellular Proteomics. 7, 10, s. 1795-1809Forskningsoutput: Tidskriftsbidrag › Artikel i vetenskaplig tidskrift
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Identification of paracrine neuroprotective candidate proteins by a functional assay-driven proteomics approach
Stefanie M. Hauck, Christian J. Gloeckner, Margaret E. Harley, Stephanie Schoeffmann, Karsten Boldt, Per Ekström & Marius Ueffing, 2008, I : Molecular & Cellular Proteomics. 7, 7, s. 1349-1361Forskningsoutput: Tidskriftsbidrag › Artikel i vetenskaplig tidskrift
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Targeted quantitative analysis of Streptococcus pyogenes virulence factors by multiple reaction monitoring
Vinzenz Lange, Johan A. Malmstroem, John Didion, Nichole L. King, Björn Johansson, Juliane Schaefer, Jonathan Rameseder, Chee-Hong Wong, Eric W. Deutsch, Mi-Youn Brusniak, Peter Buehlmann, Lars Björck, Bruno Domon & Ruedi Aebersold, 2008, I : Molecular & Cellular Proteomics. 7, 8, s. 1489-1500Forskningsoutput: Tidskriftsbidrag › Artikel i vetenskaplig tidskrift
- 2007
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Antibody microarray-based serum protein profiling of systemic lupus erythematosus and systemic sclerosis
Anders Carlsson, Dirk Wuttge, Johan Ingvarsson, Gunnar Sturfelt, Carl Borrebaeck & Christer Wingren, 2007, I : Molecular & Cellular Proteomics. October, s. S310Forskningsoutput: Tidskriftsbidrag › Publicerat konferensabstract
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Design of self-addressabl antibody microarrays based on recombinant scFv antibodies microarray adapted by molecular design
Christer Wingren, Jacob Vallkil, Charlotte Larsson, Malin Nordström, Katarina Lööf, Fredrik Höök & Carl Borrebaeck, 2007, I : Molecular & Cellular Proteomics. October, s. S311Forskningsoutput: Tidskriftsbidrag › Publicerat konferensabstract
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Recombinant antibdy microarray based oncoproteomics detects cancer and defines a predictor of survival for pancreatic carcinoma
Johan Ingvarsson, Christer Wingren, Anders Carlsson, Peter Ellmark, Britta Wahren, Gunilla Engström, Ulrika Harmenberg, Morten Krogh, Carsten Peterson & Carl Borrebaeck, 2007, I : Molecular & Cellular Proteomics. s. S311Forskningsoutput: Tidskriftsbidrag › Publicerat konferensabstract
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Serum protein profiling of metastatic breast cancer
Anders Carlsson, Christer Wingren, Johan Ingvarsson, Peter Ellmark, Bo Baldetorp, Mårten Fernö, Håkan Olsson & Carl Borrebaeck, 2007, I : Molecular & Cellular Proteomics. October, s. S311Forskningsoutput: Tidskriftsbidrag › Publicerat konferensabstract
- 2006
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Design of recombinant antibodies for high-throughput proteomics
Christer Wingren, Johan Ingvarsson, Linda Dexlin Mellby, Anders Carlsson, Jacob Vallkil & Carl Borrebaeck, 2006, I : Molecular & Cellular Proteomics. 5, s. S73Forskningsoutput: Tidskriftsbidrag › Publicerat konferensabstract
Differential modification of phosducin protein in degenerating rd1 ret is associated with constitutively active CaMKII in rod outer segments.
Stefanie M Hauck, Per Ekström, Poonam Ahuja Jensen, Sabine Suppman, Francois Paquet-Durand, Theo van Veen & Marius Ueffing, 2006, I : Molecular & Cellular Proteomics. 5, 2, s. 324-336Forskningsoutput: Tidskriftsbidrag › Artikel i vetenskaplig tidskrift
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From gene expression analysis to tissue microarrays - A rational approach to identify therapeutic and diagnostic targets in lymphoid malignancies
Sara Ek, Ulrika Andreasson, S Hober, C Kampf, F Ponten, M Uhlen, H Merz & Carl Borrebaeck, 2006, I : Molecular & Cellular Proteomics. 5, 6, s. 1072-1081Forskningsoutput: Tidskriftsbidrag › Artikel i vetenskaplig tidskrift
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High-throughput membrane proteomics using recombinant antibody microarrays
Linda Dexlin Mellby, Johan Ingvarsson, Jenny Karlsson, Peter Ellmark, Björn Frendeus, Carl Borrebaeck & Christer Wingren, 2006, I : Molecular & Cellular Proteomics. 5, 10, s. S70Forskningsoutput: Tidskriftsbidrag › Publicerat konferensabstract
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Identification of protein expression signatures associated with Helicobacter pylori infection and gastric adenocarcinoma using recombinant antibody microarrays
Peter Ellmark, Johan Ingvarsson, Anders Carlsson, B. Samuel Lundin, Christer Wingren & Carl Borrebaeck, 2006, I : Molecular & Cellular Proteomics. 5, 9, s. 1638-1646Forskningsoutput: Tidskriftsbidrag › Artikel i vetenskaplig tidskrift
- 2005
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Integrating global proteomic and genomic expression profiles generated from islet α cells: Opportunities and challenges to deriving reliable biological inferences
Marlena Maziarz, Clement Chung, Daniel J. Drucker & Andrew Emili, 2005 apr 1, I : Molecular and Cellular Proteomics. 4, 4, s. 458-474Forskningsoutput: Tidskriftsbidrag › Översiktsartikel
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A dataset of human cornea proteins identified by Peptide mass fingerprinting and tandem mass spectrometry
Henrik Karring, Ida B Thogersen, Gordon K Klintworth, Torben Moller-Pedersen & Jan J Enghild, 2005, I : Molecular & Cellular Proteomics. 4, 9, s. 1406-1408Forskningsoutput: Tidskriftsbidrag › Artikel i vetenskaplig tidskrift
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Antibody microarrays: Technology and analysis of serum proteomes from cancer patients
Christer Wingren, Johan Ingvarsson, Anders Carlsson & Carl Borrebaeck, 2005, I : Molecular & Cellular Proteomics. 4, Supplement 1, s. S338Forskningsoutput: Tidskriftsbidrag › Publicerat konferensabstract
- 2004
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Transforming growth factor-beta 1 specifically induce proteins involved in the myofibroblast contractile apparatus
Johan Malmström, Henrik Lindberg, Claes Lindberg, Charlotte Bratt, Elisabet Wieslander, Eva-Lena Delander, Bengt Särnstrand, Jorge S Burns, Peter Mose-Larsen, Stephen Fey & György Marko-Varga, 2004 maj, I : Molecular & Cellular Proteomics. 3, 5, s. 466-477 12 s.Forskningsoutput: Tidskriftsbidrag › Artikel i vetenskaplig tidskrift
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Proteomic analysis of the soluble fraction from human corneal fibroblasts with reference to ocular transparency
Henrik Karring, Ida B Thogersen, Gordon K Klintworth, Jan J Enghild & Torben Moller-Pedersen, 2004, I : Molecular & Cellular Proteomics. 3, 7, s. 660-674Forskningsoutput: Tidskriftsbidrag › Artikel i vetenskaplig tidskrift