Medicinska fakulteten

2025

Enhancing the Prediction of Lymph Node Metastasis in Early Breast Cancer Using Deep Learning on Routine Full-Breast Mammograms

Zhang, D., Dihge, L., Bendahl, P.-O., Arvidsson, I., Dustler, M., Ellbrant, J., Gulis, K., Hjärtström, M., Ohlsson, M., Rejmer, C., Schmidt, D., Zackrisson, S., Edén, P. & Ryden, L., 2025 jan. 6, (Submitted) Research Square, (Breast Cancer Research).

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

Structural characterization of an extracellular contractile injection system from Photorhabdus luminescens in extended and contracted states.

Marin-Arraiza, L., Roa-Eguiara, A., Pape, T., Hendriks, I. A., Lund Nielsen, M., Rebrova, E. M. & Taylor, N. M. I., 2025, bioRxiv.

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

2024

Multiplex genome editing eliminates the Warburg Effect without impacting growth rate in mammalian cells

Hefzi, H., Martínez-Monge, I., Marin de Mas, I., Cowie, N. L., Toledo, A. G., Noh, S. M., Karottki, K. J. L. C., Decker, M., Arnsdorf, J., Camacho-Zaragoza, J. M., Kol, S., Schoffelen, S., Pristovšek, N., Hansen, A. H., Miguez, A. A., Bjorn, S. P., Brøndum, K. K., Javidi, E. M., Jensen, K. L. & Stangl, L. & 15 andra, Kreidl, E., Kallehauge, T. B., Ley, D., Ménard, P., Petersen, H. M., Sukhova, Z., Bauer, A., Casanova, E., Barron, N., Malmström, J., Nielsen, L. K., Lee, G. M., Kildegaard, H. F., Voldborg, B. G. & Lewis, N. E., 2024 aug. 6, bioRxiv, (bioRxiv : the preprint server for biology).

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

Öppen tillgång

An annotated high-content fluorescence microscopy dataset with 2 EGFP-Galectin-3-stained cells and manually labelled outlines

Kazemi Rashed, S., Arvidsson, M., Ahmed, R. & Aits, S., 2024 juni 24, Zenodo.

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

Öppen tillgång

Medial temporal lobe atrophy patterns in early- versus late-onset amnestic Alzheimer's disease

Wuestefeld, A., Binette, A. P., van Westen, D., Strandberg, O., Stomrud, E., Mattsson-Carlgren, N., Janelidze, S., Smith, R., Palmqvist, S., Baumeister, H., Berron, D., Yushkevich, P. A., Hansson, O., Spotorno, N. & Wisse, L. E., 2024 maj 21, 32 s. (bioRxiv : the preprint server for biology).

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

The Cell Death Census 2024

Miari, M., Regnell, E. & Aits, S., 2024 apr. 8, bioRxiv.

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

Altered empathy processing in frontotemporal dementia: A task-based fMRI study

Lindberg, O., Li, T.-Q., Lind, C., Vestberg, S., Almkvist, O., Stiernstedt, M., Ericson, A., Bogdanovic, N., Hansson, O., Harper, L., Westman, E., Graff, C., Tsevis, T., Mannfolk, P., Fischer, H., Nilsonne, G., Petrovic, P., Nyberg, L., Wahlund, L.-O. & Santillo, A. F. & 1 andra, Swedish FTD initiative, 2024 mars 26, bioRxiv, 58 s.

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

Öppen tillgång

Bactogram: Spatial Analysis of Bacterial Colonization in Epidermal Wounds

Wallblom, K., Forsberg, F., Lundgren, S., Fisher, J., Cardoso, J., Petruk, G., Strömdahl, A.-C., Saleh, K., Puthia, M. & Schmidtchen, A., 2024 jan. 1, medRxiv, 33 s.

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

Population scale proteomics enables adaptive digital twin modelling in sepsis

Scott, A. M., Mellhammar, L., Malmström, E., Gustafsson, A. G., Bakochi, A., Isaksson, M., Mohanty, T., Thelaus, L., Kahn, F., Malmström, L., Malmström, J. & Linder, A., 2024 jan. 1, medRxiv.

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

2023

Analysis of bacteria, inflammation, and exudation in epidermal suction blister wounds reveals dynamic changes during wound healing

Lundgren, S., Petruk, G., Wallblom, K., Cardoso, J. F., Strömdahl, A.-C., Forsberg, F., Luo, C., Nilson, B., Hartman, E., Fisher, J., Puthia, M., Saleh, K. & Schmidtchen, A., 2023 dec. 9, medRxiv, 32 s.

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

Acoustic enrichment of heterogenous circulating tumor cells and clusters from patients with metastatic prostate cancer

Magnusson, C., Augustsson, P., Undvall Anand, E., Lenshof, A., Josefsson, A., Welén, K., Bjartell, A., Ceder, Y., Lilja, H. & Laurell, T., 2023 dec. 4, medRxiv.

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

The Influence of Narrative Specificity and Voice Quality when Listening to Audio Descriptions: a Comparison of the Sighted and the Blind

Lyberg Åhlander, V., Holsanova, J. & Johansson, R., 2023 nov. 5, PsyArXiv, 37 s.

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

Öppen tillgång

Genome-wide association study of prostate-specific antigen levels in 392,522 men identifies new loci and improves cross-ancestry prediction

Hoffmann, T. J., Graff, R. E., Madduri, R. K., Rodriguez, A. A., Cario, C. L., Feng, K., Jiang, Y., Wang, A., Klein, R. J., Pierce, B. L., Eggener, S., Tong, L., Blot, W., Long, J., Rebbeck, T., Lachance, J., Andrews, C., Adebiyi, A. O., Adusei, B. & Aisuodionoe-Shadrach, O. I. & 25 andra, Fernandez, P. W., Jalloh, M., Janivara, R., Chen, W. C., Mensah, J. E., Agalliu, I., Berndt, S. I., Shelley, J. P., Schaffer, K., Machiela, M. J., Freedman, N. D., Huang, W.-Y., Li, S. A., Goodman, P. J., Till, C., Thompson, I., Lilja, H., Van Den Eeden, S. K., Chanock, S. J., Mosley, J. D., Conti, D. V., Haiman, C. A., Justice, A. C., Kachuri, L. & Witte, J. S., 2023 okt. 30, medRxiv.

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

Event boundary perception among the visually impaired in audio described films

Johansson, R., Rastegar, T., Lyberg Åhlander, V. & Holsanova, J., 2023 okt. 24, (E-pub ahead of print) PsyArXiv, 33 s.

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

Fil

95 Nedladdningar (Pure)

Variants in the DDX6-CXCR5 autoimmune disease risk locus influence the regulatory network in immune cells and salivary gland

Wiley, M. M., Khatri, B., Joachims, M. L., Tessneer, K. L., Stolarczyk, A. M., Rasmussen, A., Anaya, J.-M., Aqrawi, L. A., Bae, S.-C., Baecklund, E., Björk, A., Brun, J. G., Bucher, S. M., Dand, N., Eloranta, M.-L., Engelke, F., Forsblad-d'Elia, H., Fugmann, C., Glenn, S. B. & Gong, C. & 31 andra, Gottenberg, J.-E., Hammenfors, D., Imgenberg-Kreuz, J., Jensen, J. L., Johnsen, S. J. A., Jonsson, M. V., Kelly, J. A., Khanam, S., Kim, K., Kvarnström, M., Mandl, T., Martín, J., Morris, D. L., Nocturne, G., Norheim, K. B., Olsson, P., Palm, Ø., Pers, J.-O., Rhodus, N. L., Sjöwall, C., Skarstein, K., Taylor, K. E., Tombleson, P., Thorlacius, G. E., Venuturupalli, S., Vital, E. M., Wallace, D. J., Grundahl, K. M., Radfar, L., Brennan, M. T. & Sjögren’s International Collaborative Clinical Alliance (SICCA), 2023 okt. 6, bioRxiv, s. 1-48, (bioRxiv : the preprint server for biology).

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

Protective non-neutralizing mAbs Ab94 and Ab81 retain high-affinity and potent Fc-mediated function against SARS-CoV-2 variants from Omicron to XBB1.5

Izadi, A., Godzwon, M., Ohlin, M. & Nordenfelt, P., 2023 sep. 29, bioRxiv.

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

Structural basis of Cfr-mediated antimicrobial resistance and mechanisms for its evasion

Aleksandrova, E. V., Wu, K. J. Y., Tresco, B. I. C., Syroegin, E. A., Killeavy, E. E., Balasanyants, S. M., Svetlov, M. S., Gregory, S. T., Atkinson, G. C., Myers, A. G. & Polikanov, Y. S., 2023 sep. 28, bioRxiv.

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

Comparison of histological delineations of medial temporal lobe cortices by four independent neuroanatomy laboratories

Wuestefeld, A., Baumeister, H., Adams, J. N., de Flores, R., Hodgetts, C., Mazloum-Farzaghi, N., Olsen, R. K., Puliyadi, V., Tran, T. T., Bakker, A., Canada, K. L., Dalton, M. A., Daugherty, A. M., Joie, R. L., Wang, L., Bedard, M., Buendia, E., Denning, A., Irwin, D. J. & Ittyerah, R. & 15 andra, Lee, E. B., Lim, S., de Onzoño Martin, M. M. I., Lopez, M. M., Schuck, T., Trotman, W., Vela, A., Yushkevich, P., Amunts, K., Augustinack, J. C., Ding, S.-L., Insausti, R., Kedo, O., Berron, D. & Wisse, L. E. M., 2023 maj 24, bioRxiv.

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

Deep learning for rapid and reproducible histology scoring of lung injury in a porcine model

Augusto Silva, I., Kazemi Rashed, S., Hedlund, L., Lidfeldt, A., Gvazava, N., Stegmayr, J., Skoryk, V., Aits, S. & Wagner, D., 2023 maj 14, bioRxiv.

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

Öppen tillgång

EasyNER: A Customizable Easy-to-Use Pipeline for Deep Learning- and Dictionary-based Named Entity Recognition from Medical Text

Ahmed, R., Berntsson, P., Skafte, A., Kazemi Rashed, S., Klang, M., Barvesten, A., Olde, O., Lindholm, W., Lamarca Arrizabalaga, A., Nugues, P. & Aits, S., 2023 apr. 16, arXiv.org.

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

Cortical changes during the learning of sequences of simultaneous finger presses

Garzon, B., Helms, G., Olsson, H., Brozzoli, C., Ullén, F., Diedrichsen, J. & Lövdén, M., 2023 mars 13, bioRxiv.

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

Mutant huntingtin expression in the hypothalamus promotes ventral striatal neuropathology

Soylu Kucharz, R., Adlesic, N., Davidsson, M., Björklund, T., Björkqvist, M. & Petersén, Å., 2023 mars 4, bioRxiv.

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

OpenChart-SE: A corpus of artificial Swedish electronic health records for imagined emergency care patients written by physicians in a crowd-sourcing project

Berg, J., Aasa, C., Appelgren Thorell, B. & Aits, S., 2023 jan. 5, medRxiv.

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

IRF1 regulates self-renewal and stress-responsiveness to support hematopoietic stem cell maintenance

Nilsson, A. R., Xian, H., Shalapour, S., Cammenga, J. & Karin, M., 2023 jan. 1, bioRxiv.

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

Precision Prognostics for Cardiovascular Disease in Type 2 Diabetes: A Systematic Review and Meta-analysis

Ahmad, A., Lim, L.-L., Morieri, M. L., Tam, C.H.-T., Cheng, F., Chikowore, T., Dudenhöffer-Pfeifer, M., Fitipaldi, H., Huang, C., Kanbour, S., Sarkar, S., Koivula, R. W., Motala, A. A., Tye, S. C., Yu, G., Zhang, Y., Provenzano, M., Sherifali, D., de Souza, R. & Tobias, D. K. & 3 andra, Gomez, M. F., Ma, R. C. W. & Mathioudakis, N., 2023, medRxiv, s. 1-73.

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

Öppen tillgång

Transcriptome-Wide Association Analysis Identifies Novel Candidate Susceptibility Genes for Prostate-Specific Antigen Levels in Men Without Prostate Cancer

Chen, D. M., Dong, R., Kachuri, L., Hoffmann, T., Jiang, Y., Berndt, S. I., Shelley, J. P., Schaffer, K. R., Machiela, M. J., Freedman, N. D., Huang, W.-Y., Li, S. A., Lilja, H., Van Den Eeden, S. K., Chanock, S., Haiman, C. A., Conti, D. V., Klein, R. J., Mosley, J. D. & Witte, J. S. & 1 andra, Graff, R. E., 2023, medRxiv, s. 1-36.

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

Öppen tillgång

2022

Single-cell analysis of myeloid cells in HPV+ tonsillar cancer

Gomez Jimenez, D., Altunbulakli, C., Swoboda, S., Sobti, A., Askmyr, D., Ali, A., Greiff, L. & Lindstedt, M., 2022 okt. 7, (BioRxiv).

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

Öppen tillgång

Data-driven microscopy allows for automated targeted acquisition of relevant data with higher fidelity

André, O., Kumra Ahnlide, J., Norlin, N., Swaminathan, V. & Nordenfelt, P., 2022 juni 10, bioRxiv.

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

Molecular and Serologic Diagnostic Technologies for SARS-CoV-2

Rando, H. M., Brueffer, C., Lordan, R., Dattoli, A. A., Manheim, D., Meyer, J. G., Mundo, A. I., Perrin, D., Mai, D., Wellhausen, N., COVID-19 Review Consortium, Gitter, A. & Greene, C. S., 2022 apr. 26, arXiv.org, (arXiv.org).

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

COVID-19 vaccine effectiveness against severe disease from the Omicron BA.1 and BA.2 subvariants: surveillance results from southern Sweden, December 2021 to March 2022

Bjork, J., Bonander, C., Moghaddassi, M., Rasmussen, M., Malmqvist, U., Inghammar, M. & Kahn, F., 2022 apr. 14, medRxiv.

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

Microarray profiling of hypothalamic gene expression changes in Huntington’s disease mouse models

Dickson, E., Sai Dwijesha, A., Andersson, N., Hult Lundh, S., Björkqvist, M., Petersén, Å. & Soylu Kucharz, R., 2022 mars 17, bioRxiv.

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

The structure of insulin granule core determines secretory capacity being reduced in type-2 diabetes

Barghouth, M., Jiang, X., Nagao, M., Chen, N., Yang, D., Ye, Y., Luan, C., Gomez, M. F., Blom, A. M., Wollheim, C. B., Eliasson, L., Renström, E. & Zhang, E., 2022 feb. 23, bioRxiv.

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

Aβ/APP-induced hyperexcitability and dysregulation of homeostatic synaptic plasticity in models of Alzheimer’s disease

Martinsson, I., Quintino, L., Garcia, M., Konings, S., Torres-Garcia, L., Svanbergsson, A., Stange, O., England, R., Deierborg, T., Li, J.-Y., Lundberg, C. & Gouras, G., 2022 jan. 25, bioRxiv.

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

Skeletal muscle regeneration is altered in the R6/2 mouse model of Huntington’s disease

Hoque, S., Sjögren, M., Allamand, V., Gawlik, K., Franke, N., Durbeej, M., Björkqvist, M. & Soylu Kucharz, R., 2022, bioRxiv, s. 1-23.

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

2021

Mapping genetic determinants of 184 circulating proteins in 26,494 individuals to connect proteins and diseases

Macdonald-Dunlop, E., Klaric, L., Folkersen, L., Timmers, P. R. H. J., Gustafsson, S., Hua Zhao, J., Eriksson, N., Richmond, A., Enroth, S., Mattsson-Carlgren, N., Zhernakova, D. V., Magnusson, M., Smith, J. G. & Hansson, O., 2021 aug. 5, medRxiv, 27 s.

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

Genetic variation at RAB3GAP2 and its role in exercise-related adaptation and recovery

Ström, K., Oskolkov, N., Karaderi, T., Kalamajski, S., Ekström, O., Miyamoto-Mikami, E., Ladenvall, C., Kakulidis, E., Reid, S., Dutius Andersson, A.-M., Kryvokhyzha, D., Zhang, E., Fadista, J., Iemitsu, M., Mahajan, A., Ahlqvist, E., Prasad, R., Pruefer, K., Sabater-Lleal, M. & Smith, N. L. & 20 andra, Dehghan, A., Lind, L., McGawley, K., Morris, A., Lehtovirta, M., Szczerbiński, L., Kretowski, A., Wang, G., Pitsiladis, Y., Santos-Lozano, A., Lucia, A., Fuku, N., Holmberg, H. C., Groop, L., Gomez, M. F., Eriksson, K.-F., Pietras, K., Lindgren, C., Franks, P. & Hansson, O., 2021 juli 16, Research Square, s. 1-16.

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

Correction of FLASH-based MT saturation in human brain for residual bias of B1-inhomogeneity at 3T

Helms, G., Weiskopf, N. & Lutti, A., 2021 maj 3, arXiv.org, 15 s.

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

Bias field correction of MPRAGE by an external reference - The poor man's MP2RAGE

Olsson, H., Andersen, M. & Helms, G., 2021 apr. 30, arXiv.org, 23 s.

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

Fil

53 Nedladdningar (Pure)

Effectiveness of the BNT162b2 vaccine in preventing COVID-19 in the working age population – first results from a cohort study in Southern Sweden

Björk, J., Inghammar, M., Moghaddassi, M., Rasmussen, M., Malmqvist, U. & Kahn, F., 2021 apr. 21, medRxiv.

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

Mendelian randomisation identifies alternative splicing of the FAS death receptor as a mediator of severe COVID-19

Klaric, L., Gisby, J. S., Papadaki, A., Muckian, M. D., Macdonald-Dunlop, E., Zhao, J. H., Tokolyi, A., Persyn, E., Pairo-Castineira, E., Morris, A. P., Kalnapenkis, A., Richmond, A., Landini, A., Hedman, Å. K., Prins, B., Zanetti, D., Wheeler, E., Kooperberg, C., Yao, C. & Petrie, J. R. & 48 andra, Fu, J., Folkersen, L., Walker, M., Magnusson, M., Eriksson, N., Mattsson-Carlgren, N., Timmers, P. R. H. J., Hwang, S.-J., Enroth, S., Gustafsson, S., Vosa, U., Chen, Y., Siegbahn, A., Reiner, A., Johansson, Å., Thorand, B., Gigante, B., Hayward, C., Herder, C., Gieger, C., Langenberg, C., Levy, D., Zhernakova, D. V., Smith, J. G., Campbell, H., Sundstrom, J., Danesh, J., Michaëlsson, K., Suhre, K., Lind, L., Wallentin, L., Padyukov, L., Landén, M., Wareham, N. J., Göteson, A., Hansson, O., Strawbridge, R. J., Assimes, T. L., Esko, T., Gyllensten, U., Baillie, J. K., Paul, D. S., Joshi, P. K., Butterworth, A. S., Mälarstig, A., Pirastu, N., Wilson, J. F. & Peters, J. E., 2021 apr. 7, medRxiv.

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

Genome-wide association study on 13,167 individuals identifies regulators of hematopoietic stem and progenitor cell levels in human blood

Lopez de Lapuente Portilla, A., Ekdahl, L., Cafaro, C., Ali, Z., Miharada, N., Thorleifsson, G., Zemaitis, K., Lamarca Arrizabalaga, A., Thodberg, M., Pertesi, M., Dhapola, P., Bao, E. L., Niroula, A., Bali, D., Norddahl, G. L., Ugidos Damboriena, N., Sankaran, V. G., Karlsson, G., Thorsteinsdottir, U. & Larsson, J. & 2 andra, Stefánsson, K. & Nilsson, B., 2021 apr. 3, bioRxiv.

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

Identification and Development of Therapeutics for COVID-19

Brueffer, C. & COVID-19 Review Consortium, 2021 mars 3, (arXiv.org).

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

Pathogenesis, Symptomatology, and Transmission of SARS-CoV-2 through analysis of Viral Genomics and Structure

Rando, H. M., MacLean, A. L., Lee, A. J., Ray, S., Bansal, V., Skelly, A. N., Sell, E., Dziak, J. J., Shinholster, L., McGowan, L. D., Guebila, M. B., Wellhausen, N., Knyazev, S., Boca, S. M., Capone, S., Qi, Y., Park, Y., Sun, Y., Mai, D. & Brueffer, C. & 12 andra, Byrd, J. B., Wang, J., Lordan, R., Velazquez, R., Szeto, G. L., Barton, J. P., Goel, R. R., Mangul, S., Lubiana, T., COVID-19 Review Consortium, Gitter, A. & Greene, C. S., 2021 feb. 1, arXiv.org.

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

Aspirin and NSAID use and the risk of COVID-19

Drew, D. A., Guo, C.-G., Lee, K. A., Nguyen, L. H., Joshi, A. D., Lo, C.-H., Ma, W., Mehta, R. S., Kwon, S., Astley, C. M., Song, M., Davies, R., Capdevila, J., Lochlainn, M. N., Sudre, C. H., Graham, M. S., Varsavsky, T., Gomez, M. F., Kennedy, B. & Fitipaldi, H. & 5 andra, Wolf, J., Spector, T. D., Ourselin, S., Steves, C. J. & Chan, A. T., 2021 jan. 1, medRxiv.

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

Öppen tillgång

Environment-wide association study (EWAS) on cardiometabolic traits: A systematic assessment of the association of lifestyle variables on a longitudinal setting

Poveda, A., Chen, Y., Pomares-Millan, H., Kurbasic, A., Patel, C. J., Renström, F., Hallmans, G., Johansson, I. & Franks, P. W., 2021, medRxiv, s. 1-4.

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

Inferring causal pathways between metabolic processes and liver fat accumulation: an IMI DIRECT study

Atabaki-Pasdar, N., Pomares-Millan, H., Koivula, R. W., Tura, A., Brown, A., Viñuela, A., Agudelo, L., Coral, D., van Oort, S., Allin, K., Chabanova, E., Cederberg, H., De Masi, F., Elders, P., Tajes, J. F., Forgie, I. M., Hansen, T. H., Heggie, A., Jones, A. & Kokkola, T. & 30 andra, Mahajan, A., McDonald, T. J., McEvoy, D., Tsirigos, K., Teare, H., Vangipurapu, J., Vestergaard, H., Adamski, J., Beulens, J. W., Brunak, S., Dermitzakis, E., Hansen, T., Hattersley, A. T., Laakso, M., Pedersen, O., Ridderstråle, M., Ruetten, H., Rutters, F., Schwenk, J. M., Walker, M., Giordano, G. N., Ohlsson, M., Gupta, R., Mari, A., McCarthy, M. I., Thomas, E. L., Bell, J. D., Pavo, I., Pearson, E. R. & Franks, P. W., 2021, medRxiv, (medRxiv).

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

Metabolic resilience is encoded in genome plasticity

Agudelo, L. Z., Tuyeres, R., Llinares, C., Morcuende, A., Park, Y., Sun, N., Linna-Kuosmanen, S., Atabaki-Pasdar, N., Ho, L.-L., Galani, K., Franks, P. W., Kutlu, B., Grove, K., Femenia, T. & Kellis, M., 2021, 26 s.

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

Predicting sensitivity and resilience to modifiable risk factors for cardiometabolic morbidity and mortality

Pomares-Millan, H., Atabaki Pasdar, N., Johansson, I., Poveda, A. & Franks, P. W., 2021, medRxiv, s. 1-28.

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

The Maternal Group B Streptococcus Alpha-Like Protein Subunit Vaccine GBS-NN Targets Homotypic and Heterotypic Strains, Confers Opsonophagocytic Killing and Prevents in vitro Invasion of Human Epithelial Cells

Pawlowski, A., Lannergård, J., Gonzalez-miro, M., Cao, D., Larsson, S., Persson, J. J., Kitsson, G., Darsley, M., Rom, A. L., Hedegaard, M., Fischer, P. & Johansson Lindbom, B., 2021, (Submitted) SSRN Sneak Peek, s. 1-58.

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

2020

precisionFDA Truth Challenge V2: Calling variants from short- and long-reads in difficult-to-map regions

Olson, N. D., Wagner, J., McDaniel, J., Stephens, S. H., Westreich, S. T., Prasanna, A. G., Johanson, E., Maier, E. J., Boja, E., Serang, O., Jáspez, D., Lorenzo-Salazar, J. M., Muñoz-Barrera, A., Rubio-Rodríguez, L. A., Flores, C., Kyriakidis, K., Malousi, A., Shafin, K., Pesout, T. & Jain, M. & 53 andra, Paten, B., Chang, P.-C., Kolesnikov, A., Nattestad, M., Baid, G., Goel, S., Yang, H., Carroll, A., Eveleigh, R., Bourgey, M., Bourque, G., Li, G., MA, C., Tang, L., DU, Y., Zhang, S., Morata, J., Tonda, R., Parra, G., Trotta, J.-R., Brueffer, C., Demirkaya-Budak, S., Kabakci-Zorlu, D., Turgut, D., Kalay, Ö., Budak, G., Narcı, K., Arslan, E., Brown, R., Johnson, I. J., Dolgoborodov, A., Semenyuk, V., Jain, A., Tetikol, H. S., Jain, V., Ruehle, M., Lajoie, B., Roddey, C., Catreux, S., Mehio, R., Ahsan, M. U., Liu, Q., Wang, K., Sahraeian, S. M. E., Fang, L. T., Mohiyuddin, M., Hung, C., Jain, C., Feng, H., Li, Z., Chen, L., Sedlazeck, F. J. & Zook, J. M., 2020 nov. 15, bioRxiv.

Forskningsoutput: Working paper/Preprint › Preprint (i preprint-arkiv)

Medicinska fakulteten

Forskningsoutput

Sökresultat