Sammanfattning

Motivation: AliGater is an open-source framework to accelerate the development of bioinformatic pipelines for the analysis of large-scale, high-dimensional flow cytometry data. AliGater provides a Python package for automatic feature extraction workflows, as well as building blocks to construct analysis pipelines. Results: We illustrate the use of AliGater in a high-resolution flow cytometry-based genome-wide association study on 46 immune cell populations in 14 288 individuals.

Originalspråkengelska
Artikelnummervbad103
TidskriftBioinformatics Advances
Volym3
Nummer1
DOI
StatusPublished - 2023

Ämnesklassifikation (UKÄ)

  • Bioinformatik och systembiologi

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